DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ine and Slc6a14

DIOPT Version :9

Sequence 1:NP_001162871.1 Gene:ine / 33659 FlyBaseID:FBgn0011603 Length:943 Species:Drosophila melanogaster
Sequence 2:XP_038955501.1 Gene:Slc6a14 / 298340 RGDID:1561810 Length:646 Species:Rattus norvegicus


Alignment Length:616 Identity:227/616 - (36%)
Similarity:361/616 - (58%) Gaps:51/616 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   320 DDSYLDMSDETAQLKPRQQHWANKMQFVLACIGYSVGLGNVWRFPYMCYKSGGGVFLVPYCIILF 384
            ::.::..:||..:    :.:|:.|..::|:.:||:|||||||||||:.|.:|||.||:||.|:|.
  Rat    29 ENFHVGENDENQE----RGNWSKKSDYLLSMVGYAVGLGNVWRFPYLTYTNGGGAFLIPYAIMLA 89

  Fly   385 ICSIPLLFMELSVGQYTGRGPIGALGQLCPLFKGAGLASVVVSFLMSTYYSVIIGYSIYYFFTSF 449
            :..:||.|:|.|:||:...||: ::.::.|||:|.|:..|::|..::.||:|||.||:||.|.||
  Rat    90 LAGLPLFFLECSLGQFASLGPV-SVWRILPLFQGVGITMVLISIFVTIYYNVIIAYSLYYLFASF 153

  Fly   450 KTEMPWIDCNNRWNTPDC------------------------WVPQR-----KGINASAPDTSRT 485
            ::.:||.:|::.|...:|                        ||...     .|.....|  .:.
  Rat   154 QSVLPWANCSSSWADDNCSRQPIVTGCRVSTDTGGDMFMNISWVNSNNFTCLNGSEVFRP--GQL 216

  Fly   486 PSEEFFENKVLQISGGLEYPGMMRWELFACLICAWLMVYFATWKSIKSSAKVRYFTATFPFVLII 550
            |||::::...|:.|.|::..|::.|.|..||:.||::|..|.:|.||||.||.||||.||:|:::
  Rat   217 PSEQYWDKVTLRRSSGMDETGVIVWYLALCLLLAWIIVGAALFKGIKSSGKVVYFTALFPYVVLL 281

  Fly   551 ILMVRAVTLDGAAEGLRFFF--RPKWSELKNANVWINAASQNFNSLGITFGSMISFASYNKYNNN 613
            ||::|..||:||::|:.::.  :..:::|:.|.||.:||:|.|.||.:.:|.:::.:||||:|||
  Rat   282 ILLIRGATLEGASKGISYYIGAQSNFTKLREAEVWKDAATQIFYSLSVAWGGLVALSSYNKFNNN 346

  Fly   614 ILRDTVAVSAVNMITSLLVGIFAFSTLGNLALEQNTNVRDVIGDGPGMIFVVYPQAMAKMPYAQL 678
            ...|.:.|...|.:||:..|...||.||::|......|..|:..|..:.|:.||:|:|::|....
  Rat   347 CYSDAIIVCLTNCLTSVFAGFAIFSILGHMAHISGKEVSQVVKSGFDLAFIAYPEALAQLPGGPF 411

  Fly   679 WAVMFFFMLLCLGLNSQFAIVEVVVTSIQDGFPRWIKRHLGYHEIVVLFVCVISCLFGMPNIIQG 743
            |:::||||||.|||:||||.:|.:.|:|||.||:.:||   ....:.|..|:|..|.|:..:.|.
  Rat   412 WSILFFFMLLTLGLDSQFASIETITTTIQDLFPKAMKR---MRVPITLGCCLILFLLGLVCVTQA 473

  Fly   744 GIYYFQLMDHYAASVTIMFLAFCQMIAIAWFYGTGRLSKNVKQMTG-KAPSFYL--RSCWLVLGP 805
            |||:..|:||:.|...|:..|..::..|.|.||..|..::::.|.| |...|:|  |:||.|:.|
  Rat   474 GIYWVHLIDHFCAGWGILIAAILEIAGIIWIYGGNRFIEDIEMMIGAKRWLFWLWWRACWFVITP 538

  Fly   806 CLLFAIWVLSLINYHEPTYHNGRYTYPDWAYGIGWMFASFSLICIPGYAVINFLRSSGDTFWERI 870
            .||.||.|.||:.:|.|.|.:  ..||||...:||....|.:|.||..|:|..:|:.|:.. :||
  Rat   539 ILLSAILVWSLVKFHRPNYAD--IPYPDWGVALGWCMIIFCIIWIPIMAIIKIVRAEGNIL-QRI 600

  Fly   871 RNTLRP----NIYECKICGEHHCEHDYPEQE 897
            ....||    ..|..|..||.:.:...|.:|
  Rat   601 IKCCRPASNWGPYLEKHRGERYKDMAEPAKE 631

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ineNP_001162871.1 SLC5-6-like_sbd 337..876 CDD:294310 217/572 (38%)
Slc6a14XP_038955501.1 SLC6sbd_ATB0 42..645 CDD:271391 225/599 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

Return to query results.
Submit another query.