DRSC/TRiP Functional Genomics Resources

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Protein Alignment ine and Slc6a6

DIOPT Version :9

Sequence 1:NP_001162871.1 Gene:ine / 33659 FlyBaseID:FBgn0011603 Length:943 Species:Drosophila melanogaster
Sequence 2:XP_008761345.1 Gene:Slc6a6 / 29464 RGDID:61912 Length:631 Species:Rattus norvegicus


Alignment Length:620 Identity:250/620 - (40%)
Similarity:366/620 - (59%) Gaps:50/620 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   328 DETAQLKPRQQHWANKMQFVLACIGYSVGLGNVWRFPYMCYKSGGGVFLVPYCIILFICSIPLLF 392
            ||.....|:::.|::|:.|||:..|..|||||||||||:|||:|||.||:||.|.||...:|:.|
  Rat    42 DEADGKPPQREKWSSKIDFVLSVAGGFVGLGNVWRFPYLCYKNGGGAFLIPYFIFLFGSGLPVFF 106

  Fly   393 MELSVGQYTGRGPIGALGQLCPLFKGAGLASVVVSFLMSTYYSVIIGYSIYYFFTSFKTEMPWID 457
            :|:.:||||..|.|....::||||.|.|.||:|:..|::.||.||:.::.||.|.||:.::||..
  Rat   107 LEVIIGQYTSEGGITCWEKICPLFSGIGYASIVIVSLLNVYYIVILAWATYYLFQSFQKDLPWAH 171

  Fly   458 CNNRWNTPDC-----------WVPQRKGINASAPDTSRTPSEEFFENKVLQISGGLEYPGMMRWE 511
            ||:.||||.|           ||      :.||.:.: :|..||:|..||.:|.|:::||.::|:
  Rat   172 CNHSWNTPQCMEDTLRRNESHWV------SLSAANFT-SPVIEFWERNVLSLSSGIDHPGSLKWD 229

  Fly   512 LFACLICAWLMVYFATWKSIKSSAKVRYFTATFPFVLIIILMVRAVTLDGAAEGLRFFFRPKWSE 576
            |..||:..||:.:|..||.::|:.||.||||||||.::::|:||.:||.||.||::|:..|..|.
  Rat   230 LALCLLLVWLVCFFCIWKGVRSTGKVVYFTATFPFAMLLVLLVRGLTLPGAGEGIKFYLYPNISR 294

  Fly   577 LKNANVWINAASQNFNSLGITFGSMISFASYNKYNNNILRDTVAVSAVNMITSLLVGIFAFSTLG 641
            |::..|||:|.:|.|.|..|..|:|.|..|||||..|..||.:.:..:|..||.:.|...||.||
  Rat   295 LEDPQVWIDAGTQIFFSYAICLGAMTSLGSYNKYKYNSYRDCMLLGCLNSGTSFVSGFAIFSILG 359

  Fly   642 NLALEQNTNVRDVIGDGPGMIFVVYPQAMAKMPYAQLWAVMFFFMLLCLGLNSQFAIVEVVVTSI 706
            .:|.||..::.||...|||:.|:.||:|:..||....|:::||.|||.|||:|||..||..:||:
  Rat   360 FMAQEQGVDIADVAESGPGLAFIAYPKAVTMMPLPTFWSILFFIMLLLLGLDSQFVEVEGQITSL 424

  Fly   707 QDGFPRWIKRHLGY-HEIVVLFVCVISCLFGMPNIIQGGIYYFQLMDHYAAS-VTIMFLAFCQMI 769
            .|.:|.::::  || .||.:..||.||.|.|:..:.:||:|.|||.|:|||| |.::::||.:..
  Rat   425 VDLYPSFLRK--GYRREIFIAIVCSISYLLGLTMVTEGGMYVFQLFDYYAASGVCLLWVAFFECF 487

  Fly   770 AIAWFYGTGRLSKNVKQMTGKAPSFYLRSCWLVLGPCLLFAIWVLSLINYHEPTYHNGRYTYPDW 834
            .|||.||...|...::.|.|..|..:::..|.|:.|.|....::.||:.|...|| |..|.||||
  Rat   488 VIAWIYGGDNLYDGIEDMIGYRPGPWMKYSWAVITPALCVGCFIFSLVKYVPLTY-NKVYRYPDW 551

  Fly   835 AYGIGWMFASFSLICIPGYAVINFLRSSGDTFWERIRNTLRPNIYECKICGEHHCEHDYPEQEQF 899
            |.|:||..|..|::|||...||...|:.| ....||:..:.|.                 |..::
  Rat   552 AIGLGWGLALSSMVCIPLVIVILLCRTEG-PLRVRIKYLITPR-----------------EPNRW 598

  Fly   900 MLAQEMATVYKPTNPHLLNLGQKCGYNAMQASPSH 934
            .:.:|.||.:. :...|:|       .|:. .|||
  Rat   599 AVEREGATPFH-SRATLMN-------GALM-KPSH 624

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ineNP_001162871.1 SLC5-6-like_sbd 337..876 CDD:294310 236/551 (43%)
Slc6a6XP_008761345.1 SLC5-6-like_sbd 51..592 CDD:382020 236/551 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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