DRSC/TRiP Functional Genomics Resources

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Protein Alignment ine and Slc6a1

DIOPT Version :9

Sequence 1:NP_001162871.1 Gene:ine / 33659 FlyBaseID:FBgn0011603 Length:943 Species:Drosophila melanogaster
Sequence 2:NP_848818.1 Gene:Slc6a1 / 232333 MGIID:95627 Length:599 Species:Mus musculus


Alignment Length:598 Identity:231/598 - (38%)
Similarity:364/598 - (60%) Gaps:30/598 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   285 STDGRKLVIRRVPTTANELFDMVNPQTPPPLGVDDDDSYLDMSDETAQLKPRQQHWANKMQFVLA 349
            :||..|:...::.|..:|          .|:..|...:.:....:.|...|.:..|..:..|:::
Mouse     2 ATDNSKVADGQISTEVSE----------APVASDKPKTLVVKVQKKAGDLPDRDTWKGRFDFLMS 56

  Fly   350 CIGYSVGLGNVWRFPYMCYKSGGGVFLVPYCIILFICSIPLLFMELSVGQYTGRGPIGALG--QL 412
            |:||::||||||||||:|.|:|||.||:||.:.|....:||..:|.|:||||.   ||.||  :|
Mouse    57 CVGYAIGLGNVWRFPYLCGKNGGGAFLIPYFLTLIFAGVPLFLLECSLGQYTS---IGGLGVWKL 118

  Fly   413 CPLFKGAGLASVVVSFLMSTYYSVIIGYSIYYFFTSFKTEMPWIDCNNRWNTPDCWVPQRKGINA 477
            .|:|||.|||:.|:||.::.||.|||.::|||.:.||.|.:||..|:|.|||..|:      .|.
Mouse   119 APMFKGVGLAAAVLSFWLNIYYIVIISWAIYYLYNSFTTTLPWKQCDNPWNTDRCF------SNY 177

  Fly   478 SAPDTSRTPSE--EFFENKVLQISGGLEYPGMMRWELFACLICAWLMVYFATWKSIKSSAKVRYF 540
            |..:|:...|.  ||:|..:.|::.||:.||.:||.|...|..||::|||..||.:..:.||.||
Mouse   178 SLVNTTNMTSAVVEFWERNMHQMTDGLDKPGQIRWPLAITLAIAWVLVYFCIWKGVGWTGKVVYF 242

  Fly   541 TATFPFVLIIILMVRAVTLDGAAEGLRFFFRPKWSELKNANVWINAASQNFNSLGITFGSMISFA 605
            :||:|::::|||..|.|||.||.||:.|:..|.:.:|.::.||::||:|.|.|.|:..||:|:..
Mouse   243 SATYPYIMLIILFFRGVTLPGAKEGILFYITPNFRKLSDSEVWLDAATQIFFSYGLGLGSLIALG 307

  Fly   606 SYNKYNNNILRDTVAVSAVNMITSLLVGIFAFSTLGNLALEQNTNVRDVIGDGPGMIFVVYPQAM 670
            |||.::||:.||::.|..:|..||:..|...||.:|.:|.....::.||...|||:.|:.||:|:
Mouse   308 SYNSFHNNVYRDSIIVCCINSCTSMFAGFVIFSIVGFMAHVTKRSIADVAASGPGLAFLAYPEAV 372

  Fly   671 AKMPYAQLWAVMFFFMLLCLGLNSQFAIVEVVVTSIQDGFPRWIKRHLGYHEIVVLFVCVISCLF 735
            .::|.:.|||::||.|||.||::|||..||..:|::.|.:||.::..   .|:.:..||::|.|.
Mouse   373 TQLPISPLWAILFFSMLLMLGIDSQFCTVEGFITALVDEYPRLLRNR---RELFIAAVCIVSYLI 434

  Fly   736 GMPNIIQGGIYYFQLMDHYAAS-VTIMFLAFCQMIAIAWFYGTGRLSKNVKQMTGKAPSFYLRSC 799
            |:.||.|||||.|:|.|:|:|| ::::||.|.:.::|:||||..|...|:::|.|..|..:.:.|
Mouse   435 GLSNITQGGIYVFKLFDYYSASGMSLLFLVFFECVSISWFYGVNRFYDNIQEMVGSRPCIWWKLC 499

  Fly   800 WLVLGPCLLFAIWVLSLINYHEPTYHNGRYTYPDWAYGIGWMFASFSLICIPGYAVINFLRSSGD 864
            |....|.::..:::.|.:.....|.  |.|.:|.|..|:||:.|..|::.||||....||...| 
Mouse   500 WSFFTPIIVAGVFLFSAVQMTPLTM--GSYVFPKWGQGVGWLMALSSMVLIPGYMAYMFLTLKG- 561

  Fly   865 TFWERIRNTLRPN 877
            :..:|::..::|:
Mouse   562 SLKQRLQVMIQPS 574

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ineNP_001162871.1 SLC5-6-like_sbd 337..876 CDD:294310 221/543 (41%)
Slc6a1NP_848818.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..23 6/30 (20%)
SLC6sbd_GAT1 2..599 CDD:212075 231/598 (39%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 577..599
PDZ-binding 597..599
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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