DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ine and dat-1

DIOPT Version :10

Sequence 1:NP_477012.1 Gene:ine / 33659 FlyBaseID:FBgn0011603 Length:943 Species:Drosophila melanogaster
Sequence 2:NP_499043.1 Gene:dat-1 / 176304 WormBaseID:WBGene00000934 Length:615 Species:Caenorhabditis elegans


Alignment Length:589 Identity:211/589 - (35%)
Similarity:331/589 - (56%) Gaps:53/589 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   324 LDMSDETAQLKPRQQHWANKMQFVLACIGYSVGLGNVWRFPYMCYKSGGGVFLVPYCIILFICSI 388
            :|....|....|.::.|:.|:.|:|:.:|::|.|||:|||||:|:|:||||||:||.|::.:..:
 Worm    27 IDGPVNTEPKDPAREQWSGKLDFLLSVVGFAVDLGNIWRFPYLCFKNGGGVFLIPYSIMVLLTGV 91

  Fly   389 PLLFMELSVGQYTGRGPIGALGQLCPLFKGAGLASVVVSFLMSTYYSVIIGYSIYYFFTSFKTEM 453
            ||.:|||.:|||..:|.|...|::||||||.|...::.:|.:..:|:||:.:.::|.:|||...:
 Worm    92 PLFYMELCLGQYYRKGAITTWGRICPLFKGIGYCVILTAFYVDFFYNVILAWGLHYLYTSFSFNL 156

  Fly   454 PWIDCNNRWNTPDCWVP--------QRKGINASAPDTSRTPSEEFFENKVLQISGGLEYP----- 505
            ||..|||.:|:|.|:.|        ..:..|.|......:.:||:|....|    ||...     
 Worm   157 PWASCNNSYNSPACYEPHWSEDGTAMCRSANQSVSAEKISAAEEYFYKGFL----GLHEANAPNS 217

  Fly   506 ---------GMMRWELFACLICAWLMVYFATWKSIKSSAKVRYFTATFPFVLIIILMVRAVTLDG 561
                     |.:||::...|...:|:.||:.||.|.:|.||.:|||.||:|::.||.:|.|||.|
 Worm   218 HVIRSVTDLGNVRWDIALSLFVVYLICYFSMWKGIHTSGKVVWFTALFPYVVLGILFIRGVTLPG 282

  Fly   562 AAEGLRFFFRPKWSELKNANVWINAASQNFNSLGITFGSMISFASYNKYNNNILRDTVAVSAVNM 626
            ...|:.::.||.:..||..:||.:||:|.|.|||..||.:::::|||.::||:..|.:..|.:|.
 Worm   283 WQNGIEYYLRPNFEMLKRPSVWQDAATQVFFSLGPGFGVLMAYSSYNDFHNNVYVDALFTSFINC 347

  Fly   627 ITSLLVGIFAFSTLGNLALEQNTNVRDVIGDGPGMIFVVYPQAMAKMPYAQLWAVMFFFMLLCLG 691
            .||.|.|...||.||.::.:....:..|..:|||::|||||:|::.||||..|:|:||.||:.||
 Worm   348 ATSFLSGFVIFSVLGYMSCKSGKPIEAVAQEGPGLVFVVYPEALSTMPYAPFWSVLFFLMLMTLG 412

  Fly   692 LNSQFAIVEVVVTSIQDGFPRWIKRHLGYHEIVVLFVCVISCLF------GMPNIIQGGIYYFQL 750
            |:|.|...|.::|.:.|.|| .:|::   .|:.|      .|||      |:....:|||...:.
 Worm   413 LDSSFGGSEAIITGLSDEFP-ILKKN---REVFV------GCLFAFYMVIGIAMCTEGGILIMEW 467

  Fly   751 MDHYAASVTIMFLAFCQMIAIAWFYGTGRLSKNVKQMTGKAPSFYLRSCWLVLGPCLLFAIWVLS 815
            :..|..:..::...||:.:.||:.||..:...:||:|.|..|..|.:.||....|.:|.::...:
 Worm   468 LIIYGTTWGLLIAVFCEAMVIAYIYGLRQFVHDVKEMMGFRPGNYWKFCWSCAAPFILLSMITSN 532

  Fly   816 LINYHEPTYHNGRYTYPDWAYGIGWMFASFSLICIPGYAVINFLRSSGDTF---WERIRNTL--- 874
            .|||...||.:  ||||..|..||.:||......||...:..|:.:.|:|.   |:|:  |:   
 Worm   533 FINYQALTYQD--YTYPTAANVIGIIFALSGASFIPLVGIYKFVNARGNTISEKWQRV--TMPYR 593

  Fly   875 -RPN 877
             |||
 Worm   594 KRPN 597

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ineNP_477012.1 SLC5-6-like_sbd 337..876 CDD:444915 205/573 (36%)
dat-1NP_499043.1 SLC6sbd_SERT-like_u1 40..591 CDD:271405 205/568 (36%)

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