DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ine and dat-1

DIOPT Version :9

Sequence 1:NP_001162871.1 Gene:ine / 33659 FlyBaseID:FBgn0011603 Length:943 Species:Drosophila melanogaster
Sequence 2:NP_499043.1 Gene:dat-1 / 176304 WormBaseID:WBGene00000934 Length:615 Species:Caenorhabditis elegans


Alignment Length:589 Identity:211/589 - (35%)
Similarity:331/589 - (56%) Gaps:53/589 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   324 LDMSDETAQLKPRQQHWANKMQFVLACIGYSVGLGNVWRFPYMCYKSGGGVFLVPYCIILFICSI 388
            :|....|....|.::.|:.|:.|:|:.:|::|.|||:|||||:|:|:||||||:||.|::.:..:
 Worm    27 IDGPVNTEPKDPAREQWSGKLDFLLSVVGFAVDLGNIWRFPYLCFKNGGGVFLIPYSIMVLLTGV 91

  Fly   389 PLLFMELSVGQYTGRGPIGALGQLCPLFKGAGLASVVVSFLMSTYYSVIIGYSIYYFFTSFKTEM 453
            ||.:|||.:|||..:|.|...|::||||||.|...::.:|.:..:|:||:.:.::|.:|||...:
 Worm    92 PLFYMELCLGQYYRKGAITTWGRICPLFKGIGYCVILTAFYVDFFYNVILAWGLHYLYTSFSFNL 156

  Fly   454 PWIDCNNRWNTPDCWVP--------QRKGINASAPDTSRTPSEEFFENKVLQISGGLEYP----- 505
            ||..|||.:|:|.|:.|        ..:..|.|......:.:||:|....|    ||...     
 Worm   157 PWASCNNSYNSPACYEPHWSEDGTAMCRSANQSVSAEKISAAEEYFYKGFL----GLHEANAPNS 217

  Fly   506 ---------GMMRWELFACLICAWLMVYFATWKSIKSSAKVRYFTATFPFVLIIILMVRAVTLDG 561
                     |.:||::...|...:|:.||:.||.|.:|.||.:|||.||:|::.||.:|.|||.|
 Worm   218 HVIRSVTDLGNVRWDIALSLFVVYLICYFSMWKGIHTSGKVVWFTALFPYVVLGILFIRGVTLPG 282

  Fly   562 AAEGLRFFFRPKWSELKNANVWINAASQNFNSLGITFGSMISFASYNKYNNNILRDTVAVSAVNM 626
            ...|:.::.||.:..||..:||.:||:|.|.|||..||.:::::|||.::||:..|.:..|.:|.
 Worm   283 WQNGIEYYLRPNFEMLKRPSVWQDAATQVFFSLGPGFGVLMAYSSYNDFHNNVYVDALFTSFINC 347

  Fly   627 ITSLLVGIFAFSTLGNLALEQNTNVRDVIGDGPGMIFVVYPQAMAKMPYAQLWAVMFFFMLLCLG 691
            .||.|.|...||.||.::.:....:..|..:|||::|||||:|::.||||..|:|:||.||:.||
 Worm   348 ATSFLSGFVIFSVLGYMSCKSGKPIEAVAQEGPGLVFVVYPEALSTMPYAPFWSVLFFLMLMTLG 412

  Fly   692 LNSQFAIVEVVVTSIQDGFPRWIKRHLGYHEIVVLFVCVISCLF------GMPNIIQGGIYYFQL 750
            |:|.|...|.::|.:.|.|| .:|::   .|:.|      .|||      |:....:|||...:.
 Worm   413 LDSSFGGSEAIITGLSDEFP-ILKKN---REVFV------GCLFAFYMVIGIAMCTEGGILIMEW 467

  Fly   751 MDHYAASVTIMFLAFCQMIAIAWFYGTGRLSKNVKQMTGKAPSFYLRSCWLVLGPCLLFAIWVLS 815
            :..|..:..::...||:.:.||:.||..:...:||:|.|..|..|.:.||....|.:|.::...:
 Worm   468 LIIYGTTWGLLIAVFCEAMVIAYIYGLRQFVHDVKEMMGFRPGNYWKFCWSCAAPFILLSMITSN 532

  Fly   816 LINYHEPTYHNGRYTYPDWAYGIGWMFASFSLICIPGYAVINFLRSSGDTF---WERIRNTL--- 874
            .|||...||.:  ||||..|..||.:||......||...:..|:.:.|:|.   |:|:  |:   
 Worm   533 FINYQALTYQD--YTYPTAANVIGIIFALSGASFIPLVGIYKFVNARGNTISEKWQRV--TMPYR 593

  Fly   875 -RPN 877
             |||
 Worm   594 KRPN 597

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ineNP_001162871.1 SLC5-6-like_sbd 337..876 CDD:294310 205/573 (36%)
dat-1NP_499043.1 SLC6sbd_SERT-like_u1 40..591 CDD:271405 205/568 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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