DRSC/TRiP Functional Genomics Resources

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Protein Alignment ine and snf-3

DIOPT Version :10

Sequence 1:NP_477012.1 Gene:ine / 33659 FlyBaseID:FBgn0011603 Length:943 Species:Drosophila melanogaster
Sequence 2:NP_493910.2 Gene:snf-3 / 173493 WormBaseID:WBGene00004902 Length:600 Species:Caenorhabditis elegans


Alignment Length:579 Identity:201/579 - (34%)
Similarity:331/579 - (57%) Gaps:33/579 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   314 PLGVDDDDS-YLDMSDETAQLKPRQQHWANKMQFVLACIGYSVGLGNVWRFPYMCYKSGGGVFLV 377
            ||..|:..: .|:.|..:.:  |.:..|..|..|:::.:.|:|||||||||||:|||:|||.|||
 Worm     8 PLPTDEAKAKELEQSQHSEE--PDRGQWTGKFDFLMSMVAYAVGLGNVWRFPYLCYKNGGGSFLV 70

  Fly   378 PYCIILFICSIPLLFMELSVGQYTGRGPIGALGQLCPLFKGAGLASVVVSFLMSTYYSVIIGYSI 442
            .|.|...:.::|:..||::||||..:|.: .:..:||||:|.|:.:||::|:...|:.||:.:::
 Worm    71 VYMIFFCLAAVPIFLMEVTVGQYLQKGAM-EMWLMCPLFRGVGIGNVVIAFMCIAYFCVIVAWAM 134

  Fly   443 YYFFTSFKTEMPWIDCNNRWNTPDCWVPQR--------KGINASAPDTSRTPSEEFFENKVLQIS 499
            :|..:|.....||..|||.||...|...:.        |.:.|||...::|..|:|:|.:||..:
 Worm   135 FYMISSIAWVFPWETCNNYWNDATCVTGKENFTELARIKALVASAGGHTQTSVEQFWEKRVLHDT 199

  Fly   500 GGLEYPGMMRWELFACLICAWLMVYFATWKSIKSSAKVRYFTATFPFVLIIILMVRAVTLDGAAE 564
            |.:...|.::||||..:..|||:||||.||.|..:.|..||.|.||:|||.||::|.:||:||..
 Worm   200 GDISEFGGIQWELFFIMAAAWLIVYFALWKGITQARKFVYFCALFPYVLIFILLIRGLTLEGAGT 264

  Fly   565 GLRFFFRPKWSELKNANVWINAASQNFNSLGITFGSMISFASYNKYNNNILRDTVAVSAVNMITS 629
            |:.|:.:|..:.|.:..||.:|.:|.|.|.|:.||::|:..|:||:|:|..:|.:.:..:|..||
 Worm   265 GIYFYLKPNATRLLDTAVWKDAGTQVFYSYGVGFGALIALGSHNKFNHNCFKDAITMCFINGCTS 329

  Fly   630 LLVGIFAFSTLGNLALEQNTNVRDVIGDGPGMIFVVYPQAMAKMPYAQLWAVMFFFMLLCLGLNS 694
            :..|...||.||.::.....::.:::..|.|:.|:.||:..:.:|..|::||:||.|:..|||:|
 Worm   330 ITAGFAVFSILGYMSHVAQKDISEIVKPGVGLAFLAYPEVASNLPMKQVFAVLFFLMITILGLDS 394

  Fly   695 QFAIVEVVVTSIQDGFP---RWIKRHLGYHEIVVLFVCVISCLF----GMPNIIQGGIYYFQLMD 752
            |..::|.:.|:::|.||   ::.|:.||           |.|||    |:|.:...|.::..|.|
 Worm   395 QVCMMEGLFTALEDAFPILRKYKKQSLG-----------IFCLFFFCIGIPMVTHSGSHWLTLFD 448

  Fly   753 HYAAS-VTIMFLAFCQMIAIAWFYGTGRLSKNVKQMTGKAPSFYLRSCWLVLGPCLLFAIWVLSL 816
            .|.|| ..::|:.|.:::.:|:.:|...:.|.:.:|.|......:...|....|.....::|..:
 Worm   449 AYGASGYALLFVVFFEVVGLAYGFGAHNIRKALHEMIGVTLPKGIEYVWKFCAPATSLVLFVFCV 513

  Fly   817 INYHEPTYHNGRYTYPDWAYGIGWMFASFSLICIPGYAVIN-FLRSSGDTFWERIRNTL 874
            :.||...|.:|: .:|.||...||..:|.|::.|||||:.. |..:...|..||:|..|
 Worm   514 VYYHPVKYPDGK-DFPFWANAFGWFLSSCSMVVIPGYAIYYLFFTNKHLTLKERVRKGL 571

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ineNP_477012.1 SLC5-6-like_sbd 337..876 CDD:444915 195/555 (35%)
snf-3NP_493910.2 SLC6sbd-TauT-like 30..571 CDD:271387 194/553 (35%)

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