DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ine and snf-2

DIOPT Version :9

Sequence 1:NP_001162871.1 Gene:ine / 33659 FlyBaseID:FBgn0011603 Length:943 Species:Drosophila melanogaster
Sequence 2:NP_492396.2 Gene:snf-2 / 172701 WormBaseID:WBGene00004901 Length:746 Species:Caenorhabditis elegans


Alignment Length:629 Identity:172/629 - (27%)
Similarity:285/629 - (45%) Gaps:113/629 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   344 MQFVLACIGYSVGLGNVWRFPYMCYKSGGGVFLVPYCIILFICSIPLLFMELSVGQYTGRGPIGA 408
            ::.:|:.:|.::||||:||||.:.|::||..||:.|.|..|:.::|.:.||.::|||..:.|...
 Worm   115 IESLLSSLGQAIGLGNIWRFPTVAYQNGGTSFLIVYIICAFVFAVPAIHMEFALGQYAAKSPPAV 179

  Fly   409 LGQLCPLFKGAGLASVVVSFLMSTYYSVIIGYSIYYFFTSFKTEMPWID----CNNRWNTPDCWV 469
            ..::.|..:|.|..:.:|..::..||.::|.:.:.|....|     :::    |:|.||..:|:.
 Worm   180 FRRIMPALEGVGWMTCIVGAVIGVYYMILISWIVLYIINIF-----YVNNMGRCDNPWNQNNCYD 239

  Fly   470 PQ-----RKGI------NASA-PDTSRTP---------------------------SEEFFENKV 495
            ..     .||:      |||: .:|:..|                           :|:||...|
 Worm   240 GSEQSRCNKGLYSNMTANASSFLNTTMAPLMSSGSKRILYINGKCQDATNMSVEVGTEQFFSKSV 304

  Fly   496 LQISGGLEYPGMMRWELFACLICAWLMVYFATWKSIKSSAKVRYFTATFPFVLIIILMVRAVTLD 560
            ::.|.|......:...:...:...|::......:.:|:..|:.|.|...|:.:|:.|::..|:|.
 Worm   305 IRPSAGFTDFNSINLPILGAVALCWVIAAVVLIRGMKAIGKLSYVTVILPYFIIVSLLICGVSLP 369

  Fly   561 GAAEGL-RFFFRPKWSELKNANVWINAASQNFNSLGITFGSMISFASYNKYNNNILRDTVAVSAV 624
            ||.:|| ..|.:..::.|.....|..|..|...||.|..|.:::.|||||...|..||...:..:
 Worm   370 GAKDGLYHLFGQTDFNYLYKRETWTAALQQICFSLSIGQGGLMNIASYNKKTYNWYRDVYIIVFL 434

  Fly   625 NMITSLLVGIFAFSTLGNLALEQNTNVRD------VIGDGPGMIFVVYPQAMAKMPYAQLWAVMF 683
            :.:.|:|.||..|||||.||.|:..|..|      ::.:|..:.|:||.:|:|:||...||..:|
 Worm   435 DTLMSILGGITVFSTLGFLAYERGINSTDIDAFNHIVKEGHALAFIVYTEAIAEMPVPYLWYALF 499

  Fly   684 FFMLLCLGLNSQFAIVEVVVTSIQDGF-----PRWIKRHLGYHEIVVLFVCVISCLFGMPNIIQG 743
            |.||..||::::..|||:|.:.:.|.|     .||         :.||.|..:..|.|:......
 Worm   500 FIMLFLLGISTEVVIVEIVCSCLADRFRYLRERRW---------LTVLSVSAVFFLLGLVMTTDA 555

  Fly   744 GIYYFQLMDHYAASVTIMFLAFCQMIAIAWFYGTGRLSKNVKQMTGKAPSFYLRSCWLVLGPCLL 808
            |.|:|.:.|.|:..::..|......:.:.|.|||....:::..|.|: |..:|.:|   |||...
 Worm   556 GFYWFDMFDEYSTGISATFGTAIMCMTVFWCYGTNHFREDIAVMWGE-PESWLATC---LGPAAY 616

  Fly   809 F--AIW-----VLSLIN----YHEPTY-HNG-RYTYPDWAYGIGWMFASFSLICIPGYAVINFLR 860
            |  .||     |.||:.    ..|..| |.| ...||.....:||..|....:.|||:|:     
 Worm   617 FWTLIWKFVTPVCSLLMMGLWIWEKKYPHKGDGKIYPPVFDALGWFIAVVPFLVIPGFAI----- 676

  Fly   861 SSGDTFWERIRNTLRPNIYECKICGEHHCEHDYPEQEQFMLAQE 904
                   ..:.||.|.||               |.:..|||.::
 Worm   677 -------AAVINTRRMNI---------------PIRGAFMLQKQ 698

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ineNP_001162871.1 SLC5-6-like_sbd 337..876 CDD:294310 165/599 (28%)
snf-2NP_492396.2 SLC6sbd 113..638 CDD:271359 150/540 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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