DRSC/TRiP Functional Genomics Resources

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Protein Alignment ine and Slc6a13

DIOPT Version :9

Sequence 1:NP_001162871.1 Gene:ine / 33659 FlyBaseID:FBgn0011603 Length:943 Species:Drosophila melanogaster
Sequence 2:XP_006237280.2 Gene:Slc6a13 / 171163 RGDID:620788 Length:608 Species:Rattus norvegicus


Alignment Length:630 Identity:245/630 - (38%)
Similarity:379/630 - (60%) Gaps:46/630 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   308 NPQTPPPLGVDDDDSYLDMSDETAQLKPRQQHWANKMQFVLACIGYSVGLGNVWRFPYMCYKSGG 372
            |.:|.|...|      ::..:|...|:  ::.|.|||:|||:..|..:||||||||||:|||:||
  Rat    11 NGETKPVCPV------MEKVEEDGTLE--REQWTNKMEFVLSVAGEIIGLGNVWRFPYLCYKNGG 67

  Fly   373 GVFLVPYCIILFICSIPLLFMELSVGQYTGRGPIGALGQLCPLFK------GAGLASVVVSFLMS 431
            |.|.:||.|.||.|.||:.|:|.::||||.:|.|.|..::||:|:      |.|.||.::..|::
  Rat    68 GAFFIPYLIFLFTCGIPVFFLETALGQYTNQGGITAWRKICPIFEASVPSPGIGYASQMIVSLLN 132

  Fly   432 TYYSVIIGYSIYYFFTSFKTEMPWIDCNNRWNTPDCWVPQR--KGINASAPDTSRTPSEEFFENK 494
            .||.|::.::::|.|:||.|::||..|::.|||.:|...|:  ..:|.:: :.:.:|..||:|.:
  Rat   133 VYYIVVLAWALFYLFSSFTTDLPWGSCSHEWNTENCVEFQKTNNSLNVTS-ENATSPVIEFWERR 196

  Fly   495 VLQISGGLEYPGMMRWELFACLICAWLMVYFATWKSIKSSAKVRYFTATFPFVLIIILMVRAVTL 559
            ||:||.|:::.|.:||||..||:.||::.||..||.:||:.||.|||||||::::::|::|.|||
  Rat   197 VLKISDGIQHLGSLRWELVLCLLLAWIICYFCIWKGVKSTGKVVYFTATFPYLMLVVLLIRGVTL 261

  Fly   560 DGAAEGLRFFFRPKWSELKNANVWINAASQNFNSLGITFGSMISFASYNKYNNNILRDTVAVSAV 624
            .|||:|::|:..|..:.|.:..||::|.:|.|.|..|..|.:.:..|||||:||..||.||:..:
  Rat   262 PGAAQGIQFYLYPNITRLWDPQVWMDAGTQIFFSFAICLGCLTALGSYNKYHNNCYRDCVALCIL 326

  Fly   625 NMITSLLVGIFAFSTLGNLALEQNTNVRDVIGDGPGMIFVVYPQAMAKMPYAQLWAVMFFFMLLC 689
            |..||.:.|...||.||.::.||...:.:|...|||:.|:.||:|:..:|::.|||..||||::.
  Rat   327 NSSTSFVAGFAIFSILGFMSQEQGVPISEVAESGPGLAFIAYPRAVVMLPFSPLWACCFFFMVVL 391

  Fly   690 LGLNSQFAIVEVVVTSIQDGFPRWIKRHLGYHEIVVLFVCVISCLFGMPNIIQGGIYYFQLMDHY 754
            |||:|||..||.:||::.|.:|| :.|.....||::|.|.|:|...|:..:.:||:|.|||.|:|
  Rat   392 LGLDSQFVCVESLVTALVDMYPR-VFRKKNRREILILIVSVVSFFIGLIMLTEGGMYVFQLFDYY 455

  Fly   755 AAS-VTIMFLAFCQMIAIAWFYGTGRLSKNVKQMTGKAPSFYLRSCWLVLGPCLLFAIWVLSLIN 818
            ||| :.::|:|..:.:.:||.||..|...|::.|.|..|...::.|||...|.:..|.::.|||.
  Rat   456 AASGMCLLFVAIFESLCVAWVYGASRFYDNIEDMIGYKPWPLIKYCWLFFTPAVCLATFLFSLIK 520

  Fly   819 YHEPTYHNGRYTYPDWAYGIGWMFASFSLICIPGYAVINFLRSSGDTFWERIRNTLRPNIYECKI 883
            |...|| |.:||||.|...:||:.|..|::|||.:::.. ||:......||:|..:.|       
  Rat   521 YTPLTY-NKKYTYPWWGDALGWLLALSSMVCIPAWSIYK-LRTLKGPLRERLRQLVCP------- 576

  Fly   884 CGEHHCEHDYPEQEQFMLAQEMATVYKPTNP-----HLLNLGQKC 923
                  ..|.|::.|..|.       .|..|     .|..|...|
  Rat   577 ------AEDLPQKSQPELT-------SPATPMTSLLRLTELESNC 608

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ineNP_001162871.1 SLC5-6-like_sbd 337..876 CDD:294310 229/547 (42%)
Slc6a13XP_006237280.2 SLC5-6-like_sbd 32..581 CDD:382020 231/565 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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