DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ine and Slc6a13

DIOPT Version :9

Sequence 1:NP_001162871.1 Gene:ine / 33659 FlyBaseID:FBgn0011603 Length:943 Species:Drosophila melanogaster
Sequence 2:NP_001366036.1 Gene:Slc6a13 / 14412 MGIID:95629 Length:602 Species:Mus musculus


Alignment Length:637 Identity:247/637 - (38%)
Similarity:382/637 - (59%) Gaps:53/637 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   298 TTANELFDMVNPQTPPPLGVDDDDSYLDMSDETAQLKPRQQHWANKMQFVLACIGYSVGLGNVWR 362
            ||:|   ....|..|....|::|.:.            .::||.|||:|||:..|..:|||||||
Mouse     8 TTSN---GETKPVCPAMEKVEEDGTL------------EREHWNNKMEFVLSVAGEIIGLGNVWR 57

  Fly   363 FPYMCYKSGGGVFLVPYCIILFICSIPLLFMELSVGQYTGRGPIGALGQLCPLFKGAGLASVVVS 427
            |||:|||:|||.|.:||.|.||.|.||:.|:|.::||||.:|.|.|..::||:|:|.|.||.::.
Mouse    58 FPYLCYKNGGGAFFIPYLIFLFTCGIPVFFLETALGQYTNQGGITAWRRICPIFEGIGYASQMIV 122

  Fly   428 FLMSTYYSVIIGYSIYYFFTSFKTEMPWIDCNNRWNTPDCWVPQR--KGINASAPDTSRTPSEEF 490
            .|::.||.|::.::::|.|:||.|::||..|::.|||.:|...|:  ..:|.:: :.:.:|..||
Mouse   123 SLLNVYYIVVLAWALFYLFSSFTTDLPWGSCSHEWNTENCVEFQKANDSMNVTS-ENATSPVIEF 186

  Fly   491 FENKVLQISGGLEYPGMMRWELFACLICAWLMVYFATWKSIKSSAKVRYFTATFPFVLIIILMVR 555
            :|.:||::|.|:::.|.:||||..||:.||::.||..||.:||:.||.|||||||::::::|::|
Mouse   187 WERRVLKLSDGIQHLGSLRWELVLCLLLAWIICYFCIWKGVKSTGKVVYFTATFPYLMLVVLLIR 251

  Fly   556 AVTLDGAAEGLRFFFRPKWSELKNANVWINAASQNFNSLGITFGSMISFASYNKYNNNILRDTVA 620
            .|||.|||:|::|:..|..:.|.:..||::|.:|.|.|..|..|.:.:..|||||:||..||.:|
Mouse   252 GVTLPGAAQGIQFYLYPNITRLWDPQVWMDAGTQIFFSFAICLGCLTALGSYNKYHNNCYRDCIA 316

  Fly   621 VSAVNMITSLLVGIFAFSTLGNLALEQNTNVRDVIGDGPGMIFVVYPQAMAKMPYAQLWAVMFFF 685
            :..:|..||.:.|...||.||.::.||...:.:|...|||:.|:.||:|:..:|::.|||..|||
Mouse   317 LCILNSSTSFMAGFAIFSILGFMSQEQGVPISEVAESGPGLAFIAYPRAVVMLPFSPLWACCFFF 381

  Fly   686 MLLCLGLNSQFAIVEVVVTSIQDGFPRWIKRHLGYHEIVVLFVCVISCLFGMPNIIQGGIYYFQL 750
            |::.|||:|||..||.:||::.|.:|| :.|.....|:::|.|.|||...|:..:.:||:|.|||
Mouse   382 MVVLLGLDSQFVCVESLVTALVDMYPR-VFRKKNRREVLILIVSVISFFIGLIMLTEGGMYVFQL 445

  Fly   751 MDHYAAS-VTIMFLAFCQMIAIAWFYGTGRLSKNVKQMTGKAPSFYLRSCWLVLGPCLLFAIWVL 814
            .|:|||| :.::|:|..:.:.:||.||.||...|::.|.|..|...::.|||...|.:..|.::.
Mouse   446 FDYYAASGMCLLFVAIFESLCVAWVYGAGRFYDNIEDMIGYKPWPLIKYCWLFFTPAVCLATFLF 510

  Fly   815 SLINYHEPTYHNGRYTYPDWAYGIGWMFASFSLICIPGYAVINFLRSSGDTFWERIRNTLRPNIY 879
            |||.|...|| |.:||||.|...:||:.|..|:||||.:::.. ||:......||:|..:.|   
Mouse   511 SLIKYTPLTY-NKKYTYPWWGDALGWLLALSSMICIPAWSIYK-LRTLKGPLRERLRQLVCP--- 570

  Fly   880 ECKICGEHHCEHDYPEQEQFMLAQEMATVYKPTNP--------HLLNLGQKC 923
                      ..|.|::.|          .:||.|        .|..|...|
Mouse   571 ----------AEDLPQKNQ----------PEPTAPATPMTSLLRLTELESNC 602

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ineNP_001162871.1 SLC5-6-like_sbd 337..876 CDD:294310 230/541 (43%)
Slc6a13NP_001366036.1 SLC5-6-like_sbd 32..575 CDD:382020 232/559 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S2921
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.770

Return to query results.
Submit another query.