DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ine and Slc6a20a

DIOPT Version :10

Sequence 1:NP_477012.1 Gene:ine / 33659 FlyBaseID:FBgn0011603 Length:943 Species:Drosophila melanogaster
Sequence 2:NP_579830.2 Gene:Slc6a20a / 113918 RGDID:621651 Length:616 Species:Rattus norvegicus


Alignment Length:627 Identity:219/627 - (34%)
Similarity:317/627 - (50%) Gaps:109/627 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   310 QTPPPLGVDDDDSYLDMSDETAQLKPRQQHWANKMQFVLACIGYSVGLGNVWRFPYMCYKSGGGV 374
            |.|.|    |:....||.      |.|.| |.|.:|||.|||.|:|||||||||||:|...|||.
  Rat    13 QRPGP----DEKRARDME------KARPQ-WGNPLQFVFACISYAVGLGNVWRFPYLCQMYGGGS 66

  Fly   375 FLVPYCIILFICSIPLLFMELSVGQYTGRGPIGALGQLCPLFKGAGLASVVVSFLMSTYYSVIIG 439
            |||||.|:|.:..:|||::||:|||...:|.|||...:.|...|.|:|||||||.:|.||:||..
  Rat    67 FLVPYLIMLIVEGMPLLYLELAVGQRMRQGSIGAWRTISPYLSGVGVASVVVSFFLSMYYNVINA 131

  Fly   440 YSIYYFFTSFKTEMPWIDCNNRWNTPDCWVPQRKGINASAPDTSRTPSEEFFENKVLQISGGLEY 504
            :..:|.|.||:..:||..|....|        |.|.:......|.|  :.|:..|.|.||..::.
  Rat   132 WGFWYLFHSFQDPLPWSVCPLNSN--------RTGYDEECEKASST--QYFWYRKTLNISPSIQE 186

  Fly   505 PGMMRWELFACLICAWLMVYFATWKSIKSSAKVRYFTATFPFVLIIILMVRAVTLDGAAEGLRFF 569
            .|.::||...||..||||||....:..:|:.||.||||..|:.::||.:||.:||.||..||.:.
  Rat   187 NGGVQWEPALCLTLAWLMVYLCILRGTESTGKVVYFTALMPYCVLIIYLVRGLTLHGATNGLMYM 251

  Fly   570 FRPKWSELKNANVWINAASQNFNSLGITFGSMISFASYNKYNNNILRDTVAVSAVNMITSLLVGI 634
            |.||..:|.|...|||||:|.|.|||:.|||:|:|||||:.:|:..:..|.||.:|..||:...|
  Rat   252 FTPKMEQLANPKAWINAATQIFFSLGLGFGSLIAFASYNEPSNDCQKHAVIVSVINSSTSIFASI 316

  Fly   635 FAFSTLG---------------------------------------------------------N 642
            ..||..|                                                         |
  Rat   317 VTFSIYGFKATFNYENCLNKVILLLTNSFDLEDGFLTASNLEEVKDYLASTYPNKYSEVFPHIRN 381

  Fly   643 LALEQ--NTNVRDVIGDGPGMIFVVYPQAMAKMPYAQLWAVMFFFMLLCLGLNSQFAIVEVVVTS 705
            .:||.  ||.|:     |.|:.|:||.:|:..|..:|||:|::|||||.||:.|.......::|.
  Rat   382 CSLESELNTAVQ-----GTGLAFIVYTEAIKNMEVSQLWSVLYFFMLLMLGMGSMLGNTAAILTP 441

  Fly   706 IQDGFPRWIKRHLGYHEIVVLFVCVISCLFGMPNIIQGGIYYFQLMDHYAASVTIMFLAFCQMIA 770
            :.|.  :.|..:|. .|.:...||:|:|..||...::.|.|:|.:.:.|||:::::.:...:.||
  Rat   442 LTDS--KVISSYLP-KEAISGLVCLINCAVGMVFTMEAGNYWFDIFNDYAATLSLLLIVLVETIA 503

  Fly   771 IAWFYGTGRLSKNVKQMTGKAPSFYLRSCWLVLGPCLLFAIWVLSLINYHEPTYHNGRYTYPDW- 834
            :.:.||..|...:::.|||:..::|.::.|..:.|.|:..:::..|.:|    ...|...|..| 
  Rat   504 VCYVYGLRRFESDLRAMTGRPLNWYWKAMWAFVSPLLIIGLFIFYLSDY----ILTGTLQYQAWD 564

  Fly   835 -AYG--------------IGWMFASFSLICIPGYAVINFLRS 861
             ..|              ||.:.|| |.:|||..|:..|:|:
  Rat   565 ATQGQLVTKDYPPHALAVIGLLVAS-STMCIPLVALGTFIRN 605

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ineNP_477012.1 SLC5-6-like_sbd 337..876 CDD:444915 211/600 (35%)
Slc6a20aNP_579830.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..26 5/16 (31%)
SLC5-6-like_sbd 26..601 CDD:444915 211/604 (35%)

Return to query results.
Submit another query.