DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ine and slc6a12

DIOPT Version :9

Sequence 1:NP_001162871.1 Gene:ine / 33659 FlyBaseID:FBgn0011603 Length:943 Species:Drosophila melanogaster
Sequence 2:XP_031754510.1 Gene:slc6a12 / 100492029 XenbaseID:XB-GENE-6033368 Length:612 Species:Xenopus tropicalis


Alignment Length:594 Identity:252/594 - (42%)
Similarity:369/594 - (62%) Gaps:23/594 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly   332 QLKPRQQHWANKMQFVLACIGYSVGLGNVWRFPYMCYKSGGGVFLVPYCIILFICSIPLLFMELS 396
            :::.|.| |:||::|||:..|..:||||||||||:|||:|||.|.:||.|.||.|.||:.|:|.:
 Frog    31 EIEDRGQ-WSNKVEFVLSVAGEIIGLGNVWRFPYLCYKNGGGAFFIPYLIFLFTCGIPVFFLETA 94

  Fly   397 VGQYTGRGPIGALGQLCPLFKGAGLASVVVSFLMSTYYSVIIGYSIYYFFTSFKTEMPWIDCNNR 461
            :||||.:|.|.|..::||||:|.|.||.|:...::.||.||:.::::|.|:||..|:||..|||.
 Frog    95 LGQYTSQGGITAWRKICPLFEGIGYASQVIEGYLNIYYIVILAWALFYLFSSFTAELPWATCNNT 159

  Fly   462 WNTPDCWVPQRKGINASAPDTSRTPSEEFFENKVLQISGGLEYPGMMRWELFACLICAWLMVYFA 526
            |||..|.....|..|.::.:.|.:...||:|.:||.:|.|:|:.|.:||:|..||:.||::.||.
 Frog   160 WNTEHCIDFVGKSENFTSLENSTSSVVEFWERRVLHLSEGIEHLGNVRWDLALCLLLAWIICYFC 224

  Fly   527 TWKSIKSSAKVRYFTATFPFVLIIILMVRAVTLDGAAEGLRFFFRPKWSELKNANVWINAASQNF 591
            .||.:||:.||.|||||||:|::|||:||.|||.||.||:.|:.:|..:.|::..||::|.:|.|
 Frog   225 IWKGVKSTGKVVYFTATFPYVMLIILLVRGVTLPGAYEGIIFYLKPDMTRLQDPQVWMDAGTQIF 289

  Fly   592 NSLGITFGSMISFASYNKYNNNILRDTVAVSAVNMITSLLVGIFAFSTLGNLALEQNTNVRDVIG 656
            .|..|..|.:.:..||||||||..||.:|:..:|.|||.:.|...||.||.:|.||...:.:|..
 Frog   290 FSYAICQGCLTALGSYNKYNNNCYRDCIALCFLNSITSFVAGFAIFSVLGFMAQEQGVPISEVAE 354

  Fly   657 DGPGMIFVVYPQAMAKMPYAQLWAVMFFFMLLCLGLNSQFAIVEVVVTSIQDGFPRWIKRHLGYH 721
            .|||:.|:.||:|:..||.:.||:.:||.||:.|||:|||..||.:||:|.|.||. :.|.....
 Frog   355 SGPGLAFIAYPKAVTMMPVSPLWSCLFFLMLIFLGLDSQFVCVESLVTAIVDMFPH-VFRKKYRR 418

  Fly   722 EIVVLFVCVISCLFGMPNIIQGGIYYFQLMDHYAASVT-IMFLAFCQMIAIAWFYGTGRLSKNVK 785
            |..:|.|.||..|.|:..:.:||:|.|||.|:||||.| ::|:|..::|.:.:.||..|...|::
 Frog   419 EFFILAVAVICYLLGLILLTEGGMYVFQLFDYYAASGTCLLFVAIFEVICVGYVYGANRFYDNIE 483

  Fly   786 QMTGKAPSFYLRSCWLVLGPCLLFAIWVLSLINYHEPTYHNGRYTYPDWAYGIGWMFASFSLICI 850
            .|.|..|...::.|||...|.:....::.|||.| .|..:|.||.||.|.|.|||:.|..|:|||
 Frog   484 DMIGYRPWPLVKYCWLFATPAVCLGTFLFSLIKY-SPLKYNNRYVYPSWGYAIGWLMALSSMICI 547

  Fly   851 PGYAVINFLRSSGDTFWERIRNTLRPNIYECKICGEHHCEHDYPEQEQFMLAQEMATVYKPTNPH 915
            |.||....||:.| :|.:|::..:.|:.             |.|:.::::  ::.|   .|....
 Frog   548 PIYAFYIILRTKG-SFTQRLKQLVTPHT-------------DLPQPKKYL--KDRA---DPKQIE 593

  Fly   916 LLNLGQKCG 924
            :|.|..|.|
 Frog   594 VLGLEAKDG 602

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ineNP_001162871.1 SLC5-6-like_sbd 337..876 CDD:294310 242/539 (45%)
slc6a12XP_031754510.1 SLC5-6-like_sbd 34..572 CDD:382020 243/541 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
22.010

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