DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ine and slc6a19a.2

DIOPT Version :9

Sequence 1:NP_001162871.1 Gene:ine / 33659 FlyBaseID:FBgn0011603 Length:943 Species:Drosophila melanogaster
Sequence 2:XP_002665492.2 Gene:slc6a19a.2 / 100334171 ZFINID:ZDB-GENE-141210-16 Length:647 Species:Danio rerio


Alignment Length:646 Identity:191/646 - (29%)
Similarity:322/646 - (49%) Gaps:111/646 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   340 WANKMQFVLACIGYSVGLGNVWRFPYMCYKSGGGVFLVPYCIILFICSIPLLFMELSVGQYTGRG 404
            |.||.|::|.|:|:.|||||||||||:|...|||.|::|:.|:|.:..||||.:|.::||...||
Zfish    36 WDNKAQYMLTCVGFCVGLGNVWRFPYLCQSHGGGAFMIPFLILLVLEGIPLLHLEFAIGQRLRRG 100

  Fly   405 PIGALGQLCPLFKGAGLASVVVSFLMSTYYSVIIGYSIYYFFTSFKTEMPWIDC--NNRWNTPDC 467
            .:|....:.|...|.|:||::|||::..||:.||.:.::|||.||:..:||..|  |.       
Zfish   101 SVGVWRSINPYLLGVGIASMLVSFIVGMYYNTIIAWVMWYFFNSFQDPLPWSQCPING------- 158

  Fly   468 WVPQRKGINASAPDTSRTPSEEFFENKVLQISGGLEYPGMMRWELFACLICAWLMVYFATWKSIK 532
               .|.|..:....:|  |.:.|:..|.|..:..:|..|.::|.:...|:|||.:::....:.|:
Zfish   159 ---SRTGFVSECERSS--PVDYFWYRKTLNTTPHIEDSGGLQWWMVLSLLCAWTVLWVCCIRGIE 218

  Fly   533 SSAKVRYFTATFPFVLIIILMVRAVTLDGAAEGLRFFFRPKWSELKNANVWINAASQNFNSLGIT 597
            ::.|..|.|:|.|::::.|.::|.:||.|:..|::|.|.|..:||.:...|::|.:|.|.|..:.
Zfish   219 TTGKAVYITSTLPYLVLTIFLIRGLTLKGSVSGIKFLFTPDVNELLDPQTWLDAGAQVFFSFSLA 283

  Fly   598 FGSMISFASYNKYNNNILRDTVAVSAVNMITSLLVGIFAFSTLGNLALEQ-----NTNVRDVIG- 656
            ||.:|:|:|||..:||..:|.|.:|.:|.:||:...|..:|.:|..|.|:     |.|:..::. 
Zfish   284 FGGLIAFSSYNSVHNNCEQDAVIISIINGMTSIYAAIVIYSIIGFRATERFDDCLNGNILSLLNA 348

  Fly   657 ----------------------------------------------DGPGMIFVVYPQAMAKMPY 675
                                                          :|.|:.|:|:.:|:.|||.
Zfish   349 FDLPEGSIIEGNYTEAIQQLNISRPDIIQELQLKTCDMQTFLSQGVEGTGLAFIVFTEAITKMPV 413

  Fly   676 AQLWAVMFFFMLLCLGLNSQFAIVEVVVTSIQ--DGFPR-WIKRHLGYHEIVVLFVCVISCLFGM 737
            :.||:|:||.||.||||::.|..:|.||..:|  |..|: |.|      |.....|||:|..|.:
Zfish   414 SPLWSVLFFIMLFCLGLSTMFGSIEGVVVPLQDLDILPKNWPK------EAYTALVCVVSFAFAI 472

  Fly   738 PNIIQGGIYYFQLMDHYAASVTIMFLAFCQMIAIAWFYGTGRLSKNVKQMTGKAPSFYLRSCWLV 802
            ......|.|:..|.|.:|.|:.::.:|||:|:|:::.||..|.:.::|.|.|..|:.:.::.|.:
Zfish   473 IFAQGSGEYWLALFDGFAVSIPLLIIAFCEMMAVSYVYGIDRFNDDIKFMIGHKPNIFWQATWRL 537

  Fly   803 LGPCLLFAIWV----------LSLINYHEPTYHN----GRYTYPDWAYGIGWMFASFSLICIPGY 853
            :.|.::..|::          |:.|.: :|...|    ....||.|...|.::.|...::.||..
Zfish   538 ISPLIVLVIFLFYFVTTVSKKLTYIAW-DPESENFPTLSVLPYPGWISAIIFILAGIPVLVIPTV 601

  Fly   854 AVINFLRSSGDTFWERIRNTLRPNIYECKICGEHHCEHDYPEQEQFMLAQEMATVYKPTNP 914
            |::..:|:..                 ||....|..|..|...::..:.:|.    :..||
Zfish   602 ALVRLIRNRC-----------------CKKEETHATETPYSISDRVQMMEET----EQNNP 641

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ineNP_001162871.1 SLC5-6-like_sbd 337..876 CDD:294310 183/606 (30%)
slc6a19a.2XP_002665492.2 SLC5-6-like_sbd 33..613 CDD:294310 183/612 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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