DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ine and slc6a11b

DIOPT Version :9

Sequence 1:NP_001162871.1 Gene:ine / 33659 FlyBaseID:FBgn0011603 Length:943 Species:Drosophila melanogaster
Sequence 2:XP_017213744.2 Gene:slc6a11b / 100150472 ZFINID:ZDB-GENE-121116-2 Length:617 Species:Danio rerio


Alignment Length:586 Identity:241/586 - (41%)
Similarity:355/586 - (60%) Gaps:15/586 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly   294 RRVPTTANELFDMVNPQTPPPLGVDDDDSYLDMSDETAQLKPRQQHWANKMQFVLACIGYSVGLG 358
            :.:|....:..:.::|::..|..|..:|.  .:.:|..|       |.||::|||:..|..:|||
Zfish     5 KSIPIINGKAEESMDPESANPSAVRSNDK--KVVNERGQ-------WNNKVEFVLSVAGEIIGLG 60

  Fly   359 NVWRFPYMCYKSGGGVFLVPYCIILFICSIPLLFMELSVGQYTGRGPIGALGQLCPLFKGAGLAS 423
            |||||||:|||:|||.|.|||.|....|.||:.|:|.::||:|..|.|....::||||:|.|.|:
Zfish    61 NVWRFPYLCYKNGGGAFFVPYVIFFVCCGIPVFFLETALGQFTSEGGITCWRKVCPLFEGIGYAT 125

  Fly   424 VVVSFLMSTYYSVIIGYSIYYFFTSFKTEMPWIDCNNRWNTPDCWVPQRKGINASAPDTSRTPSE 488
            .|:...::.||.||:.::|:|.|..|.||:||..|.:.|||.:|.....:.|.......|.:|..
Zfish   126 QVIEAHLNVYYVVILAWAIFYLFNCFTTELPWASCGHYWNTENCVDFNNESIANFTNPYSTSPVM 190

  Fly   489 EFFENKVLQISGGLEYPGMMRWELFACLICAWLMVYFATWKSIKSSAKVRYFTATFPFVLIIILM 553
            ||:|.:||:||.|:|..|.:||||..||..||::.||..||..||:.||.|.|||||:.:::||:
Zfish   191 EFWERRVLKISSGIEEVGGLRWELALCLAIAWVICYFCIWKGPKSTGKVVYVTATFPYFMLLILL 255

  Fly   554 VRAVTLDGAAEGLRFFFRPKWSELKNANVWINAASQNFNSLGITFGSMISFASYNKYNNNILRDT 618
            :|.:||.|||.|::|:..|..|.|.:..||::|.:|.|.|..|..|.:.:..|||.||||..||.
Zfish   256 LRGITLPGAANGIKFYLYPDISRLSDPQVWVDAGTQIFFSYAICLGCLTALGSYNSYNNNCYRDC 320

  Fly   619 VAVSAVNMITSLLVGIFAFSTLGNLALEQNTNVRDVIGDGPGMIFVVYPQAMAKMPYAQLWAVMF 683
            :.:..:|..||.:.|...||.||.:|.|||..:..|...|||:.|:.||:|:..||:|.|||.:|
Zfish   321 LMLCCLNSGTSFVAGFAIFSVLGFMAYEQNVPIEAVAESGPGLAFIAYPKAVTMMPWAPLWAALF 385

  Fly   684 FFMLLCLGLNSQFAIVEVVVTSIQDGFPRWIKRHLGY-HEIVVLFVCVISCLFGMPNIIQGGIYY 747
            |.||:.|||:|||..||.:||:|.|.:|:..:  :|| .|:::|.:.:.|...|:..:.:||:|.
Zfish   386 FMMLIFLGLDSQFVCVESLVTAIVDMYPKTFR--VGYRRELLILGMSIASFFLGLIMLTEGGMYV 448

  Fly   748 FQLMDHYAAS-VTIMFLAFCQMIAIAWFYGTGRLSKNVKQMTGKAPSFYLRSCWLVLGPCLLFAI 811
            |||.|.|||| :.::|:|..:.|.|.|.||:.|...|::.|.|..|.|:::.||....|.:...|
Zfish   449 FQLFDSYAASGMCLLFVAIFESICIGWVYGSDRFYLNIEDMIGYKPIFFIKWCWKFFTPGICTGI 513

  Fly   812 WVLSLINYHEPTYHNGRYTYPDWAYGIGWMFASFSLICIPGYAVINFLRSSGDTFWERIRNTLRP 876
            ::..||.| :|..:|..||||||.||||||.|..|::|||...:....::.| ||.|||:....|
Zfish   514 FLFFLIKY-KPLKYNNVYTYPDWGYGIGWMMAMSSMVCIPLGILFQIWKTKG-TFRERIKKLTTP 576

  Fly   877 N 877
            :
Zfish   577 S 577

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ineNP_001162871.1 SLC5-6-like_sbd 337..876 CDD:294310 233/540 (43%)
slc6a11bXP_017213744.2 SLC5-6-like_sbd 38..576 CDD:320982 235/548 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.920

Return to query results.
Submit another query.