DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ine and XB5944457

DIOPT Version :9

Sequence 1:NP_001162871.1 Gene:ine / 33659 FlyBaseID:FBgn0011603 Length:943 Species:Drosophila melanogaster
Sequence 2:NP_001106493.1 Gene:XB5944457 / 100127682 XenbaseID:XB-GENE-5944458 Length:599 Species:Xenopus tropicalis


Alignment Length:597 Identity:233/597 - (39%)
Similarity:363/597 - (60%) Gaps:30/597 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   285 STDGRKLVIRRVPTTANELFDMVNPQTPPPLGVDDDDSYLDMSDETAQLKPRQQHWANKMQFVLA 349
            :|:|.|:...::.|..:|          .|:..|...:.:....:....:..:..|..:..|:::
 Frog     2 ATNGTKVADGQISTEVSE----------APVTNDKPKTLVVKVQKKKTEEVERDTWKGRFDFLMS 56

  Fly   350 CIGYSVGLGNVWRFPYMCYKSGGGVFLVPYCIILFICSIPLLFMELSVGQYTGRGPIGALG--QL 412
            |:||::||||||||||:|.|:|||.||:||.:.|....:||..:|.|:||||.   ||.||  :|
 Frog    57 CVGYAIGLGNVWRFPYLCGKNGGGAFLIPYFLTLIFAGVPLFLLECSLGQYTS---IGGLGVWKL 118

  Fly   413 CPLFKGAGLASVVVSFLMSTYYSVIIGYSIYYFFTSFKTEMPWIDCNNRWNTPDCWVPQRKGINA 477
            .|:|||.|||:.|:||.::.||.|||.::|||.:.||.|.:||..|:|.|||..|:      .|.
 Frog   119 APMFKGVGLAAAVLSFWLNIYYIVIIAWAIYYLYNSFTTTLPWKHCDNSWNTERCF------SNY 177

  Fly   478 SAPDTSRTPSE--EFFENKVLQISGGLEYPGMMRWELFACLICAWLMVYFATWKSIKSSAKVRYF 540
            |..:|:...|.  ||:|..:.|::.|||.||.:||.|...|..||::|||..||.:..:.||.||
 Frog   178 SIANTTNMTSAVVEFWERNMHQMTDGLEKPGQIRWPLAITLAIAWVLVYFCIWKGVGWTGKVVYF 242

  Fly   541 TATFPFVLIIILMVRAVTLDGAAEGLRFFFRPKWSELKNANVWINAASQNFNSLGITFGSMISFA 605
            :||:|:::::||..|.|||.||.:|:.|:..||:|:|.::.||::||:|.|.|.|:..||:|:..
 Frog   243 SATYPYIMLVILFFRGVTLPGALDGILFYITPKFSKLSDSEVWLDAATQIFFSYGLGLGSLIALG 307

  Fly   606 SYNKYNNNILRDTVAVSAVNMITSLLVGIFAFSTLGNLALEQNTNVRDVIGDGPGMIFVVYPQAM 670
            |||:::||:.||::.|..:|..||:..|...||.:|.:|......:..|...|||:.|:.||:|:
 Frog   308 SYNRFHNNVYRDSIIVCCINSCTSMFAGFVIFSIVGFMAHVTKRPIEQVAASGPGLAFLAYPEAV 372

  Fly   671 AKMPYAQLWAVMFFFMLLCLGLNSQFAIVEVVVTSIQDGFPRWIKRHLGYHEIVVLFVCVISCLF 735
            .::|.:.||||:||.|||.||::|||..||..:|::.|.||:.::..   .||.:..|||:|.|.
 Frog   373 TQLPISPLWAVLFFSMLLMLGIDSQFCTVEGFITALVDEFPKLLRTR---REIFIAVVCVVSYLV 434

  Fly   736 GMPNIIQGGIYYFQLMDHYAAS-VTIMFLAFCQMIAIAWFYGTGRLSKNVKQMTGKAPSFYLRSC 799
            |:.||.|||||.|:|.|:|:|| ::::||.|.:.|:|:|.||..|...|:::|.|..|..:.:.|
 Frog   435 GLSNITQGGIYVFKLFDYYSASGMSLLFLVFFECISISWCYGVNRFYDNIEEMVGYRPCIWWKLC 499

  Fly   800 WLVLGPCLLFAIWVLSLINYHEPTYHNGRYTYPDWAYGIGWMFASFSLICIPGYAVINFLRSSGD 864
            |....|.::..:::.|.:.....|.  |.|.:|.|..|:||..|..|::.||||.|..||...| 
 Frog   500 WSFFTPIIVAGVFLFSAVQMTPLTM--GSYVFPSWGQGVGWFMALSSMVLIPGYMVYLFLSLKG- 561

  Fly   865 TFWERIRNTLRP 876
            :..:|::..::|
 Frog   562 SLKQRLQVMIQP 573

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ineNP_001162871.1 SLC5-6-like_sbd 337..876 CDD:294310 225/543 (41%)
XB5944457NP_001106493.1 SLC6sbd_GAT1 2..599 CDD:212075 233/597 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

Return to query results.
Submit another query.