DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ine and slc6a14

DIOPT Version :10

Sequence 1:NP_477012.1 Gene:ine / 33659 FlyBaseID:FBgn0011603 Length:943 Species:Drosophila melanogaster
Sequence 2:XP_002939712.3 Gene:slc6a14 / 100127180 XenbaseID:XB-GENE-480827 Length:634 Species:Xenopus tropicalis


Alignment Length:631 Identity:244/631 - (38%)
Similarity:366/631 - (58%) Gaps:63/631 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   321 DSYLDMSDETAQLKPRQQHWANKMQFVLACIGYSVGLGNVWRFPYMCYKSGGGVFLVPYCIILFI 385
            :|:....||..:    :.:|:.|..::|:.|||:|||||||||||:.||:|||.||:||.|:|.:
 Frog    20 ESHSGSGDENKE----RGNWSKKSDYLLSMIGYAVGLGNVWRFPYLAYKNGGGAFLIPYTIMLAL 80

  Fly   386 CSIPLLFMELSVGQYTGRGPIGALGQLCPLFKGAGLASVVVSFLMSTYYSVIIGYSIYYFFTSFK 450
            ..:||.|:|.|:||::..||: .:.:..|:.:|.|:..|:|:..:|.||::||.||:||.|.||:
 Frog    81 AGLPLFFLECSMGQFSSSGPV-LVWRAVPILQGVGITMVLVTTFVSIYYNIIIAYSLYYMFASFQ 144

  Fly   451 TEMPWIDCNNRWNTPDC----------------------WVPQRKGI---NASAPDTSRTPSEEF 490
            |.:||.|| ..|....|                      ||.:|...   |:...:....||:::
 Frog   145 TILPWSDC-FAWADEKCSKVTRGFCNVSLSNNTVAYNLTWVKERNLTCIENSIVMEDVDLPSKQY 208

  Fly   491 FENKVLQISGGLEYPGMMRWELFACLICAWLMVYFATWKSIKSSAKVRYFTATFPFVLIIILMVR 555
            :|...|::||||:..|.:.|.|..||:.||::|..|.:|.||||.||.||||.||::::|||:||
 Frog   209 WEKVTLRLSGGLDETGEIVWYLALCLLLAWIIVGAALFKGIKSSGKVVYFTAIFPYIVLIILLVR 273

  Fly   556 AVTLDGAAEGLRFFFRPK--WSELKNANVWINAASQNFNSLGITFGSMISFASYNKYNNNILRDT 618
            ..||:||..|:.::...|  .::|..|.||.:||:|.|.||...:|.:|:.:||||::||...|.
 Frog   274 GATLEGAFNGIDYYIGTKSNITKLMEAEVWKDAATQIFFSLSTAWGGLIALSSYNKFHNNCYSDA 338

  Fly   619 VAVSAVNMITSLLVGIFAFSTLGNLALEQNTNVRDVIGDGPGMIFVVYPQAMAKMPYAQLWAVMF 683
            :.|...|.:||:..|...||.||::|...:..|.:|:..|.|:.|:.||:|:||:|.:.||:.:|
 Frog   339 IVVCVTNCLTSVFAGFAIFSILGHMAFVTDKPVPEVVDSGFGLAFIAYPEALAKLPISPLWSFLF 403

  Fly   684 FFMLLCLGLNSQFAIVEVVVTSIQDGFPRWIKRHLGYHEIVVLFVCVISCLFGMPNIIQGGIYYF 748
            |||||.|||:||||::|.::|||||.||:.:||   ....|.:..|||..|.|:..:.|.|||:.
 Frog   404 FFMLLTLGLDSQFAMIETIITSIQDAFPQMMKR---MRIPVTIGCCVILFLLGLLCVTQSGIYWV 465

  Fly   749 QLMDHYAASVTIMFLAFCQMIAIAWFYGTGRLSKNVKQMTG-KAPSFYL--RSCWLVLGPCLLFA 810
            .|:|::.....|:|.|..:::.|.|.||..|..|:::.|.| |..:|::  |:||.|:.|.||.|
 Frog   466 NLIDYFCGGWAILFSAVLELVGINWIYGGNRFIKDIEMMIGEKHWTFWIWWRACWFVVSPLLLTA 530

  Fly   811 IWVLSLINYHEPTYHNGRYTYPDWAYGIGWMFASFSLICIPGYAVINFLRSSGDTFWERIRNTLR 875
            |.:.|||.:|.|||  |...||.|...|||....|.||.||..||:..:|:.|:.          
 Frog   531 ILLWSLITFHSPTY--GSVVYPTWGTAIGWCMICFCLIWIPIVAVLKIIRAKGNV---------- 583

  Fly   876 PNIYECKIC---GEHHCEHDYPEQEQFML------AQEMATVYKPT 912
              :..||..   |....:| ..|:.:.||      |:|:.||.|.|
 Frog   584 --LQTCKAAQNWGPALSQH-RGERYKHMLDSKQAHAEELPTVSKLT 626

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ineNP_477012.1 SLC5-6-like_sbd 337..876 CDD:444915 228/568 (40%)
slc6a14XP_002939712.3 SLC6sbd_ATB0 32..628 CDD:271391 241/615 (39%)

Return to query results.
Submit another query.