DRSC/TRiP Functional Genomics Resources

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Protein Alignment FIG4 and SYNJ1

DIOPT Version :10

Sequence 1:NP_608841.1 Gene:FIG4 / 33658 FlyBaseID:FBgn0031611 Length:858 Species:Drosophila melanogaster
Sequence 2:NP_003886.3 Gene:SYNJ1 / 8867 HGNCID:11503 Length:1612 Species:Homo sapiens


Alignment Length:556 Identity:157/556 - (28%)
Similarity:235/556 - (42%) Gaps:130/556 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 FRLLTIDRLAHNRLSIEENANEFNSLEIRRFVASLSGS---------PKVTSAYGVLGFVRFLEG 96
            |.|:...|.....|..|..|           ||.||.:         .||..|||:||.:|...|
Human    57 FSLIVETRHKEECLMFESGA-----------VAVLSSAEKEAIKGTYSKVLDAYGLLGVLRLNLG 110

  Fly    97 ----YYLLLVTKRKCCAHIGRHLVYTIKDTVMVRV--NEVTSQRPPHPHEDRYKRMFQNIDLRSN 155
                :||:|||.   |..:|:     |:::.:.||  .|..|.|.....|||...:.:.:: ..|
Human   111 DTMLHYLVLVTG---CMSVGK-----IQESEVFRVTSTEFISLRIDSSDEDRISEVRKVLN-SGN 166

  Fly   156 FYFSYSYDLTRTLQYNESAPRYVGAKVDLDRDEPLPDWNTLTSNVDKAHERVDYAFRSDSRKRFV 220
            |||::|..               |..:||..:               ||..:.   ...:..||.
Human   167 FYFAWSAS---------------GISLDLSLN---------------AHRSMQ---EQTTDNRFF 198

  Fly   221 WNAYLLQPME--GIMLKDWLLEVTHGFVSQSCISIFGRHVNVCLVARRSSRFAGTRFLKRGANFQ 283
            ||..|...::  |:...||||.:..|.|....|....:....||::|.|...|||||..||.|..
Human   199 WNQSLHLHLKHYGVNCDDWLLRLMCGGVEIRTIYAAHKQAKACLISRLSCERAGTRFNVRGTNDD 263

  Fly   284 GDVANEVETEQIVSDGQRICAFTQMRGSIPSHWSQDISKMVPKPQIQLDI--------CDPYAQT 340
            |.|||.|||||:|.....:.:|.|:|||:|..|.|        |.:|:..        .:..|..
Human   264 GHVANFVETEQVVYLDDSVSSFIQIRGSVPLFWEQ--------PGLQVGSHRVRMSRGFEANAPA 320

  Fly   341 PSLHFERLLFHYGAPLIMLNLVKKRERRKHESIISKELEYSIRYLNQFLPPPHR--MKHIHFDMA 403
            ...||..|...||..:| :||:..:|   .|.::||..:..::      ...|.  ::.::||. 
Human   321 FDRHFRTLKNLYGKQII-VNLLGSKE---GEHMLSKAFQSHLK------ASEHAADIQMVNFDY- 374

  Fly   404 RQSRLSGGNVMEQLAIHAESIVQ--MTGMFFKAAGSE-PGLQTGIVRTNCVDCLDRTNSAQFAIG 465
             ...:.||.. |:|....:..||  :...||...||| ...|:|.|||||:||||||||.|..:|
Human   375 -HQMVKGGKA-EKLHSVLKPQVQKFLDYGFFYFNGSEVQRCQSGTVRTNCLDCLDRTNSVQAFLG 437

  Fly   466 KCALGHQLERLGFVKSAKLEFDSDCVTMLENLYEE----HGDTLALQYGGSQLVH---RIKTYRK 523
            ...|..|||.||..:..:|      ||..:.::..    :||:::..|.|:..:.   ::|    
Human   438 LEMLAKQLEALGLAEKPQL------VTRFQEVFRSMWSVNGDSISKIYAGTGALEGKAKLK---- 492

  Fly   524 TAPWGSQGSDVMQTLSRYYSNTFSDTEKQHSINLFL 559
                     |..::::|...|.|.|:.||.:|::.|
Human   493 ---------DGARSVTRTIQNNFFDSSKQEAIDVLL 519

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FIG4NP_608841.1 Syja_N 85..407 CDD:460545 93/339 (27%)
SYNJ1NP_003886.3 COG5329 73..519 CDD:227637 152/538 (28%)
INPP5c_Synj1 572..907 CDD:197332
DUF1866 906..1047 CDD:286093
Atrophin-1 1049..>1426 CDD:460830
Blue background indicates that the domain is not in the aligned region.

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