DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment FIG4 and Sacm1l

DIOPT Version :9

Sequence 1:NP_608841.1 Gene:FIG4 / 33658 FlyBaseID:FBgn0031611 Length:858 Species:Drosophila melanogaster
Sequence 2:NP_001344414.1 Gene:Sacm1l / 83493 MGIID:1933169 Length:609 Species:Mus musculus


Alignment Length:584 Identity:164/584 - (28%)
Similarity:257/584 - (44%) Gaps:106/584 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 RFRLLTIDRLAHNRLSIEENANEFNSLEIRRFVASLSGSPKVTSAYGVLGFVRFLEGYYLLLVTK 104
            :|.:...|..|.:.|.|:..:.|. :|.:::.|..   |......:|:||.:..:.|.||:::||
Mouse    17 KFYVEACDDGADDVLIIDRVSTEV-TLAVKKDVPP---SAVTRPIFGILGTIHLVAGNYLVVITK 77

  Fly   105 RKCCAHIGRHLVYTIKD-------TVMVRVNEVTSQRPPHPHEDRYKRMFQNIDLRSNFYFSYSY 162
            :........|.|:...|       ..|:.:.::..|     ....:..|..::.....||||.:|
Mouse    78 KMKVGECFNHAVWRATDFDVLSYKKTMLHLTDIQLQ-----DNKTFLAMLNHVLSMDGFYFSTTY 137

  Fly   163 DLTRTLQYNESAPRYVGAKVDLDRDEPLPDWNTLTSNVDKAHERVDYAFRSDSRKRFVWNAYLLQ 227
            |||.|||                          ..||.....:.:....|:|  :|||||.:||:
Mouse   138 DLTHTLQ--------------------------RLSNTSPEFQEMSLLERAD--QRFVWNGHLLR 174

  Fly   228 PMEG-IMLKDWLLEVTHGFVSQSCISIFGRHVNVCLVARRSSRFAGTRFLKRGANFQGDVANEVE 291
            .:.. ..:..:.|.|.|||::....||.|::.:..|::|||...||.|:..||.:.:|..||.||
Mouse   175 ELSAQPEVHRFALPVLHGFITMHSCSINGKYFDWILISRRSCFRAGVRYYVRGIDSEGHAANFVE 239

  Fly   292 TEQIVSDGQRICAFTQMRGSIPSHWSQDIS-KMVPKPQIQ--LDICDPYAQTPSLHFERLLFHYG 353
            |||||.......:|.|.|||||..|||..: |..|.|||.  .:..|.:.:    ||:..:..||
Mouse   240 TEQIVHYSGNRASFVQTRGSIPIFWSQRPNLKYKPHPQISKVANHMDGFQR----HFDSQVIIYG 300

  Fly   354 APLIMLNLVKKRERRK-----HESIISKELEYSIRYLNQFLPPPHRMKHIHFDMARQSRLSGGNV 413
            ..:| :|||..:...|     ..:::|......|||             |.||..::.:    |:
Mouse   301 KQVI-INLVNHKGSEKPLEQTFANMVSSLGSGMIRY-------------IAFDFHKECK----NM 347

  Fly   414 -MEQLAIHAESIVQM----TGMFFKAAGSEPGLQTGIVRTNCVDCLDRTNSAQFAIGKCALGHQL 473
             .::|:|..:.:.:|    :.....:||.....|.|:.|:||:|||||||..|..:.:.:|..||
Mouse   348 RWDRLSILLDQVAEMQDELSYFLVDSAGKVVTNQDGVFRSNCMDCLDRTNVIQSLLARRSLQAQL 412

  Fly   474 ERLGFVK-SAKLEFDSDCVTMLENLYEEHGDTLALQYGGSQLVHRIKT-YRKTAPWGSQG--SDV 534
            :|||.:. ..|||...:.....:|.:.::.:..|.||.|:   ..:|| :.:|......|  .|.
Mouse   413 QRLGVLHVGQKLEEQDEFEKTYKNAWADNANACAKQYAGT---GALKTDFTRTGKRTQLGLLMDG 474

  Fly   535 MQTLSRYYSNTFSDTEKQHSINLFLGIYKPSLTKQGPPIWELQTDYDMHNAFVPRADSKAITDW 598
            ..:|.|||.|.|||..:|.||:||||.|.....:...|:            .|||       ||
Mouse   475 FNSLLRYYKNNFSDGFRQDSIDLFLGNYSVDELESHSPL------------SVPR-------DW 519

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FIG4NP_608841.1 COG5329 19..599 CDD:227637 164/584 (28%)
Syja_N 85..407 CDD:280532 95/337 (28%)
Sacm1lNP_001344414.1 COG5329 57..513 CDD:227637 149/513 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5329
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D359616at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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