DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment FIG4 and Sac1

DIOPT Version :9

Sequence 1:NP_608841.1 Gene:FIG4 / 33658 FlyBaseID:FBgn0031611 Length:858 Species:Drosophila melanogaster
Sequence 2:NP_001189016.1 Gene:Sac1 / 38137 FlyBaseID:FBgn0283500 Length:592 Species:Drosophila melanogaster


Alignment Length:560 Identity:165/560 - (29%)
Similarity:259/560 - (46%) Gaps:89/560 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 LLTIDRLAHNRLSIEENANEFNSLEIRRFVASLSGSPKVTSAYGVLGFVRFLEGYYLLLVTKRKC 107
            ||.|.|  |::::..:.|:       ...||:|..:.::.   ||||.:..|...|||:.|.|..
  Fly    32 LLVIGR--HDKVTRVQPAS-------GGLVANLRPTRRIC---GVLGTIHLLSCDYLLVATHRLF 84

  Fly   108 CAHIGRHLVYTIKDTVMVRVNEVTSQRPPHPHEDRYKRMF-QNIDLRSNFYFSYSYDLTRTLQYN 171
            ...:...:|:.:....::.....:.||   ...:.|.|:. |.:|.:. |||||.||||.:||..
  Fly    85 VGVLNGAVVWRLAGYDIIPYIPNSFQR---KENENYLRLLRQTLDTKF-FYFSYRYDLTNSLQRQ 145

  Fly   172 ----ESAPRYVGAKVDLDRDEPLPDWNTLTSNVDKAHERVDYAFRSDSRKRFVWNAYLLQPMEGI 232
                :|.|...|.   |.|.|                            :|||||.|:|:.....
  Fly   146 REVAQSRPEVSGL---LQRAE----------------------------QRFVWNGYVLRQFNCD 179

  Fly   233 MLKDWLLEVTHGFVSQSCISIFGRHVNVCLVARRSSRFAGTRFLKRGANFQGDVANEVETEQIVS 297
            .::.:.|.:..||||.:.:.|.|:.....::.|||.:.||||...||::.||.|||.|||||||.
  Fly   180 KMEKFQLPLVLGFVSINQVQINGQTFFWSIITRRSVQRAGTRLFCRGSDEQGHVANFVETEQIVE 244

  Fly   298 DGQRICAFTQMRGSIPSHWSQDISKMVPKPQIQLDICDPYAQTPSLHFERLLFHYGAPLIMLNLV 362
            ...::..|.|.|||:|.||.| :..:..||:..|.....:.....|||:..:..||.. :.:|||
  Fly   245 FNGQLTGFVQTRGSMPFHWHQ-LPNLRYKPRPVLVPGKDHLAACGLHFKEQIRLYGNN-VAVNLV 307

  Fly   363 KKRERRKHESIISKELEYSIRYLNQFLPPPHRMKHIHFDM---ARQSRLSGGNVMEQLAIHAESI 424
                  .|:. ...|||.:...|.:.:..| ::::..||.   .|:.|....|::.....|.:..
  Fly   308 ------DHKG-AEGELEATYARLVREMGNP-QVRYESFDFHSECRKMRWDRLNILIDRLAHEQDQ 364

  Fly   425 VQMTGMFFKAAGSEPGLQTGIVRTNCVDCLDRTNSAQFAIGKCALGHQLERLGFVK-SAKLEFDS 488
            ..:..:|  ..|.....|||:.||||:|||||||..|..:.:.:|...|::||.:. ..|:|..|
  Fly   365 FGVYHVF--DDGKLVSTQTGVFRTNCIDCLDRTNVVQSMLARRSLTAVLQKLGVLHVGQKVEHAS 427

  Fly   489 DCV-TMLENLYEEHGDTLALQYGGSQLVHRIKT-YRKTAPWGSQGS--DVMQTLSRYYSNTFSDT 549
            |.. ::.:.::.::.|.::|||.|:   ..:|| :.:|......|:  |...:|.|||.|.|:|.
  Fly   428 DIFESIFKGVWADNADLVSLQYSGT---CALKTDFTRTGKRTKSGAMQDGKNSLMRYYLNNFADG 489

  Fly   550 EKQHSINLFLGIY-----------KPSLTKQGPPIWELQT 578
            ::|.||:||||.|           .|..:|.|   |...|
  Fly   490 QRQDSIDLFLGKYLVNDNEGGAVPSPLESKHG---WRFFT 526

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FIG4NP_608841.1 COG5329 19..599 CDD:227637 165/560 (29%)
Syja_N 85..407 CDD:280532 98/329 (30%)
Sac1NP_001189016.1 COG5329 3..566 CDD:227637 165/560 (29%)
Syja_N 62..344 CDD:280532 97/329 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45447398
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5329
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D359616at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.750

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