DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment FIG4 and fig4

DIOPT Version :10

Sequence 1:NP_608841.1 Gene:FIG4 / 33658 FlyBaseID:FBgn0031611 Length:858 Species:Drosophila melanogaster
Sequence 2:NP_001018284.3 Gene:fig4 / 3361401 PomBaseID:SPAC1093.03 Length:832 Species:Schizosaccharomyces pombe


Alignment Length:932 Identity:284/932 - (30%)
Similarity:427/932 - (45%) Gaps:193/932 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 NNDNPNIVFNPLISSIQKVVLYETRARLYLVGSNNRETRFRLLTI----DRLAHNRLSIEENANE 62
            |:|.|.:.|.          ||:.:...|:|..|...|.||:|.|    |.|:   :||||.|..
pombe     5 NSDEPLVKFE----------LYQLKKCYYIVSENATATIFRILKITQSEDELS---ISIEEAAKI 56

  Fly    63 FNSLEIRRFVASLSGSPK------VTSAYGVLGFVRFLEGYYLLLVTKRKCCAHIGRHLVYTIKD 121
            ....:::.::..|.....      ||.||.:||..||..||||.|.|:||..|.||.|.||.:..
pombe    57 LFRQKLQLYLEKLENESADGKLILVTKAYAILGLFRFTAGYYLYLCTERKVVAVIGGHNVYHVDK 121

  Fly   122 TVMVRVNEVTSQRPPHPHEDRYKR----MFQNIDLRSNFYFSYSYDLTRTLQYNESAPRYVGAKV 182
            |..:.:|      |...|....:|    ..:.:||...|||||||||::|:||..:         
pombe   122 TQFIELN------PSRRHNTSVERKCMSSIEKVDLARTFYFSYSYDLSQTIQYGFT--------- 171

  Fly   183 DLDRDEPLPDWNTLTSNVDKAHERVDYAFRSDSRKRFVWNAYLLQP-MEGIML-KDWLLEVTHGF 245
                 .|:|.           |:         .|..||||..:|:| ::.:.: ..|.:.:.|||
pombe   172 -----HPIPQ-----------HQ---------VRDMFVWNWNMLRPILDSVGIDSPWCIPLIHGF 211

  Fly   246 VSQSCISIFGRHVNVCLVARRSSRFAGTRFLKRGANFQGDVANEVETEQIVSDGQR--------- 301
            |.|:.:|::|:.:.|.|:||||..|||.|||:||....|.|||||||||||.||..         
pombe   212 VDQAKLSVYGKPIIVTLIARRSRHFAGARFLRRGIRDDGYVANEVETEQIVFDGSASSFPISSTT 276

  Fly   302 -----ICAFTQMRGSIPSHWSQDISKMVPKPQIQLDICDPYAQTPSLHFERLLFHYGAPLIMLNL 361
                 ..::.|.|||||..|||:.|.:.|||.|.:|..||:..:.:|||:||..|||.|.|:|||
pombe   277 PGIPCYTSYVQHRGSIPLRWSQEFSNITPKPPIGIDFHDPFYASTALHFDRLFGHYGIPCIVLNL 341

  Fly   362 VKKRERRKHESIISKELEYSIRYLNQFLPPPHRMKHIHFDM--ARQSRLSGGNVMEQLAIHAESI 424
            ||..|:.|.||::..|.|.:|:||||||....::::|.:||  |.:.::.....:||:   |..|
pombe   342 VKSSEKVKRESLLLDEFESAIQYLNQFLKDSQKIQYIAWDMSAASKKKVPVTKTLEQM---ASDI 403

  Fly   425 VQMTGMFFKAAGSEPG-LQTGIVRTNCVDCLDRTNSAQFAIGKCALGHQLERLGFVKSAKLEFDS 488
            |:.||.|..|....|| .|||:|||||||||||||:|||.||||.|..||..||.:.|.:|:::|
pombe   404 VKKTGFFCTADRFFPGTFQTGVVRTNCVDCLDRTNAAQFVIGKCVLAAQLRALGVLDSPQLDYES 468

  Fly   489 DCVTMLENLYEEHGDTLALQYGGSQLVHRIKTYRKTAPWGSQGSDVMQTLSRYYSNTFSDTEKQH 553
            |.|.:|..:|..|||.:|||||||.||:.:.||||...|.|...|:::::.|:|||:|.|.::|.
pombe   469 DAVRLLAEMYHGHGDAIALQYGGSLLVNTLDTYRKNNQWSSTSRDLIESVKRFYSNSFVDFQRQE 533

  Fly   554 SINLFLGIYKPSLTKQGPPIWELQTDYDMHNAFVPRADSK--AITD------------------- 597
            :|:||||                  ::.:|...|...:.:  |:|:                   
pombe   534 AISLFLG------------------NFTVHGKIVVFGEKRLQALTEKFKNGQLVRRDYRYWWTPV 580

  Fly   598 WVRHKVRACLPYSCADSNKLVKELFRVHSSGLEM-IDAYSNYHQSFKWTDFSE----HIAFEISQ 657
            :|..::| |....| ||         :...|::. .:.:.|.:.....:.|||    ::...::.
pombe   581 YVNQELR-CKNAYC-DS---------IQRKGIKFPANYFDNVYTPNSISSFSEVLLPNLISTLNF 634

  Fly   658 LALRYMPTFRTNFSPFQRQIQTSRKARQNPSMTGQSSTGSMNSNSSSSSEGDDSSSDEELSA--- 719
            ..|..:|..|.:|.|.............||.:..::....|...|:.....|:...|::...   
pombe   635 APLSLIPLLRKSFLPLSYNGFGIEAPSLNPFIPRRNQPRDMFKTSAEEENEDEDEDDDKFRRVSL 699

  Fly   720 -------------SFAEKEANQTESTEPAAATLATGLPSMEEIYGCTINPPS----KQSMAVYKK 767
                         .|..|..:|              :|...::.......|.    ...:.|||.
pombe   700 YKWLFNNEERPVHKFIRKRLHQ--------------IPVSNKVQPRDQKQPDFKIPNTDINVYKI 750

  Fly   768 YVQMGKLSSGGARPAQTAVAQRDQELAKIMRGITLRPLSDYGTDSYLSVRPPVVPRKSLTIYAEY 832
            :.|...:|  |.....|.:::.|:.:        ....:||..|....::     .|.|..|.:|
pombe   751 HFQYNNIS--GLADNYTLLSKHDRAM--------YNNYADYSPDKIKEIK-----EKELNTYNDY 800

  Fly   833 CRTRSTFNAVPKLEEFDVLYQY 854
            ..:..:.|...|.:..:.:..|
pombe   801 FNSAISENPTLKSDRSEKVAFY 822

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FIG4NP_608841.1 Syja_N 85..407 CDD:460545 133/343 (39%)
fig4NP_001018284.3 Syja_N 85..387 CDD:460545 133/341 (39%)

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