DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment FIG4 and sacm1l

DIOPT Version :9

Sequence 1:NP_608841.1 Gene:FIG4 / 33658 FlyBaseID:FBgn0031611 Length:858 Species:Drosophila melanogaster
Sequence 2:NP_001344516.1 Gene:sacm1l / 100497354 XenbaseID:XB-GENE-920710 Length:608 Species:Xenopus tropicalis


Alignment Length:566 Identity:162/566 - (28%)
Similarity:263/566 - (46%) Gaps:104/566 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 LLTIDRLAHNRLSIEENANEFNSLEIRRFVASLSGSPKV------TSAYGVLGFVRFLEGYYLLL 101
            :|||||:               |.|:     :|:|...:      .:.||:||.:|.:.|.||::
 Frog    29 VLTIDRV---------------STEV-----TLTGKKDIPPSAITRAIYGILGTIRLVAGMYLIV 73

  Fly   102 VTKRKCCAHIGRHLVYTIKDTVMVRVNEVTSQRPPHPHEDR--YKRMFQNIDLRSNFYFSYSYDL 164
            :|::|....:..|.::...|..::...:..........:|.  :..|..::.....||||.||||
 Frog    74 ITRKKKVGDLLNHSIWKATDFDIISYKKTMLHLTDTQLQDNKAFLAMISHVLSVDGFYFSVSYDL 138

  Fly   165 TRTLQYNESAPRYVGAKVDLDRDEPLPDWNTLTSNVDKAHERVDYAFRSDSRKRFVWNAYLL--- 226
            |.|||                          ..||.....:.:....|:|  :|||||.:||   
 Frog   139 THTLQ--------------------------RLSNTSPEFQEMSLLERAD--QRFVWNGHLLREF 175

  Fly   227 --QPMEGIMLKDWLLEVTHGFVSQSCISIFGRHVNVCLVARRSSRFAGTRFLKRGANFQGDVANE 289
              ||    .::.:.:.|.|||::....||.|::.:..|::|||...||.|:..||.:.:|..||.
 Frog   176 SAQP----EIQKFAIPVVHGFIAIHSCSINGKYFDWILISRRSCFRAGVRYYVRGIDSEGHAANF 236

  Fly   290 VETEQIVSDGQRICAFTQMRGSIPSHWSQDIS-KMVPKPQIQ--LDICDPYAQTPSLHFERLLFH 351
            |||||||.......:|.|.|||||.:|||..: |..|||||.  ::..|.:.:    ||:..:..
 Frog   237 VETEQIVHYNGNKASFVQTRGSIPFYWSQRPNLKYKPKPQISKAVNHMDGFQR----HFDSQIIS 297

  Fly   352 YGAPLIMLNLVKKRERRKHESIISKELEYSIRYLNQFLPPPHRMKHIHFDMARQ-SRLSGGNVME 415
            ||.. ::||||.::...|.   :.:.....:..|...:     :::|.||..:: ||:.    .:
 Frog   298 YGKQ-VVLNLVNQKGSEKP---LEQAFSQMVSGLGNGM-----LRYIAFDFHKECSRMR----WD 349

  Fly   416 QLAIHAESIVQMT---GMFF-KAAGSEPGLQTGIVRTNCVDCLDRTNSAQFAIGKCALGHQLERL 476
            :|.|..:.:.:..   |.|. .:.|.....|.||.|:||:|||||||..|..:.:.:|..||:||
 Frog   350 RLQILVDQVSETQDDFGYFLVDSDGKVVSQQEGIFRSNCMDCLDRTNVVQSLLARRSLQFQLQRL 414

  Fly   477 GFVK-----SAKLEFDSDCVTMLENLYEEHGDTLALQYGGSQLVHR--IKTYRKTAPWGSQGSDV 534
            |.:.     ..:::|:.    :.:|.:.::.:..|.||.|:..:..  .:|.::| .||.. .|.
 Frog   415 GVLHVGQRIEEQIQFEK----IYKNAWADNANACAKQYAGTGALKTDFTRTGKRT-QWGLL-MDG 473

  Fly   535 MQTLSRYYSNTFSDTEKQHSINLFLGIYKPSLTKQGPPIWELQTDY 580
            ..:|.|||.|.|||..:|.||:||||.|.........|: .:|||:
 Frog   474 WNSLMRYYKNNFSDGFRQDSIDLFLGNYSVEEVYSSSPL-HIQTDW 518

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FIG4NP_608841.1 COG5329 19..599 CDD:227637 162/566 (29%)
Syja_N 85..407 CDD:280532 95/332 (29%)
sacm1lNP_001344516.1 COG5329 33..518 CDD:227637 158/560 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D359616at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

Return to query results.
Submit another query.