DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15436 and Sry-beta

DIOPT Version :9

Sequence 1:NP_608840.1 Gene:CG15436 / 33657 FlyBaseID:FBgn0031610 Length:346 Species:Drosophila melanogaster
Sequence 2:NP_001303451.1 Gene:Sry-beta / 43570 FlyBaseID:FBgn0003511 Length:356 Species:Drosophila melanogaster


Alignment Length:314 Identity:74/314 - (23%)
Similarity:120/314 - (38%) Gaps:71/314 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 CMDISGKLVNIFDARRRTRVSI-AEMIAQCTGFEVKRGDLFSEMICPQCYEDVKSAYGIRQTCEE 71
            |..:.||......|.:|.||.: |..|.|.|..                 ::.:...|....|||
  Fly    90 CRQVEGKAETKQQAAKRARVQVPAFKIVQATAL-----------------KEPERQPGEEDECEE 137

  Fly    72 SHQFYCRVRDEGIEDALCALLEEEDWEISEDEDARIDSASAADDDGKSDSKKVAFECRECHKKYQ 136
            .      :::|        :|:|| ::.||.:    ||..:::::..:::.::            
  Fly   138 F------MKEE--------MLDEE-FQFSEPD----DSMPSSEEEFFTETTEI------------ 171

  Fly   137 RKGTFLRHMRTHMDGQSFPCPYCKRNFRLRVTLKAHMKTHNAAKPYE--CSHCAKTFAQQSTLQS 199
                              ||..|...|..:..|:.|:|.....|..:  |:.|.........|..
  Fly   172 ------------------PCHICGEMFSSQEVLERHIKADTCQKSEQATCNVCGLKVKDDEVLDL 218

  Fly   200 HERTHTGERPFKCSQCSKTFIKSSDLRRHIRTHGSERPFKCSKCTKTFTRKFHLDNHFRSHTG-E 263
            |...|.|:...:|..|.|.|....::.||:..|..::.::|.||.:.|:..:.:.||...|.. |
  Fly   219 HMNLHEGKTELECRYCDKKFSHKRNVLRHMEVHWDKKKYQCDKCGERFSLSWLMYNHLMRHDAEE 283

  Fly   264 RPFKCSHCPKAFAMKQHLKQHSRLHLPDRP-FRCSHCPKTFRLSSTLKEHKLVH 316
            ....|..|.:.|..|:..|.|.|.|..||| :.|..|.|:|....|||.||.||
  Fly   284 NALICEVCHQQFKTKRTYKHHLRTHQTDRPRYPCPDCEKSFVDKYTLKVHKRVH 337

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15436NP_608840.1 zf-AD 4..78 CDD:285071 15/70 (21%)
C2H2 Zn finger 128..148 CDD:275368 0/19 (0%)
C2H2 Zn finger 156..176 CDD:275368 6/19 (32%)
COG5048 <180..341 CDD:227381 44/141 (31%)
C2H2 Zn finger 184..204 CDD:275368 4/19 (21%)
zf-H2C2_2 197..219 CDD:290200 7/21 (33%)
C2H2 Zn finger 212..232 CDD:275368 6/19 (32%)
zf-H2C2_2 224..249 CDD:290200 7/24 (29%)
C2H2 Zn finger 240..260 CDD:275368 6/19 (32%)
zf-H2C2_2 252..276 CDD:290200 6/24 (25%)
C2H2 Zn finger 268..288 CDD:275368 7/19 (37%)
C2H2 Zn finger 296..316 CDD:275368 9/19 (47%)
C2H2 Zn finger 324..341 CDD:275368
Sry-betaNP_001303451.1 C2H2 Zn finger 203..223 CDD:275368 4/19 (21%)
C2H2 Zn finger 231..251 CDD:275368 6/19 (32%)
C2H2 Zn finger 259..308 CDD:275368 15/48 (31%)
C2H2 Zn finger 288..303 CDD:275370 4/14 (29%)
zf-C2H2 315..337 CDD:278523 9/21 (43%)
C2H2 Zn finger 317..337 CDD:275368 9/19 (47%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45446541
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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