DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15436 and CG4854

DIOPT Version :9

Sequence 1:NP_608840.1 Gene:CG15436 / 33657 FlyBaseID:FBgn0031610 Length:346 Species:Drosophila melanogaster
Sequence 2:NP_650860.1 Gene:CG4854 / 42391 FlyBaseID:FBgn0038766 Length:319 Species:Drosophila melanogaster


Alignment Length:325 Identity:95/325 - (29%)
Similarity:134/325 - (41%) Gaps:65/325 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 CRVCMDISGKLVNIFDARRRTRVSIAEMIAQCTGFEVKRGDLFSEMICPQCYEDVKSAYGIRQTC 69
            ||:|: :..|..::..    |.....:.|.:|||.|:.....:...||..|...:::|..:|..|
  Fly    12 CRICL-VQPKDESLMP----TEPDFPDKIKRCTGVELSESPDWPNRICTSCALLLRAALKLRSLC 71

  Fly    70 EESHQFYCR----------VRDE------------------GIEDAL---------CALLEEEDW 97
            :::.:....          |.||                  |.:..|         ..|...||.
  Fly    72 QQTEKDLKEQKLQEINIEIVHDEQETKKKTESRDLSKNEATGSDSELEYEYLDSYDVTLESSEDV 136

  Fly    98 EISEDEDARIDSASAADDDG--KSDSKKVAFECRECHKKYQRKGTFLRHMRTHMDGQ--SFPCPY 158
            ..|.||...|:.|.:|.::.  ....|.|.||..:                   .||  ||.|..
  Fly   137 ACSADELVSIEPAISAPEESVYSLSPKPVTFEDED-------------------SGQAASFTCNI 182

  Fly   159 CKRNFRLRVTLKAHMKTHNAAKPYECSHCAKTFAQQSTLQSHERTHTGERPFKCSQCSKTFIKSS 223
            |...:..||.|..|||.|:|.||:||..|.|.|.|...|..|..||||.||:||..|...|...|
  Fly   183 CNNVYSERVKLTNHMKVHSAKKPHECEICHKRFRQTPQLARHMNTHTGNRPYKCDYCDSRFADPS 247

  Fly   224 DLRRHIRTHGSERPFKCSKCTKTFTRKFHLDNHFRSHTGERPFKCSHCPKAFAMKQHLKQHSRLH 288
            ...:|.|.|.:|||:||..|:::|.....|..|.::|||||||.|.:|.|:|:...|...|.:.|
  Fly   248 TRIKHQRIHTNERPYKCEFCSRSFGYSNVLRVHLKTHTGERPFSCQYCQKSFSQLHHKNSHEKSH 312

  Fly   289  288
              Fly   313  312

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15436NP_608840.1 zf-AD 4..78 CDD:285071 16/72 (22%)
C2H2 Zn finger 128..148 CDD:275368 0/19 (0%)
C2H2 Zn finger 156..176 CDD:275368 8/19 (42%)
COG5048 <180..341 CDD:227381 47/109 (43%)
C2H2 Zn finger 184..204 CDD:275368 7/19 (37%)
zf-H2C2_2 197..219 CDD:290200 11/21 (52%)
C2H2 Zn finger 212..232 CDD:275368 6/19 (32%)
zf-H2C2_2 224..249 CDD:290200 10/24 (42%)
C2H2 Zn finger 240..260 CDD:275368 5/19 (26%)
zf-H2C2_2 252..276 CDD:290200 12/23 (52%)
C2H2 Zn finger 268..288 CDD:275368 6/19 (32%)
C2H2 Zn finger 296..316 CDD:275368
C2H2 Zn finger 324..341 CDD:275368
CG4854NP_650860.1 zf-AD 12..>57 CDD:285071 12/49 (24%)
C2H2 Zn finger 180..200 CDD:275368 8/19 (42%)
zf-H2C2_2 193..217 CDD:290200 13/23 (57%)
COG5048 201..>258 CDD:227381 25/56 (45%)
C2H2 Zn finger 208..228 CDD:275368 7/19 (37%)
zf-H2C2_2 221..244 CDD:290200 11/22 (50%)
C2H2 Zn finger 236..256 CDD:275368 6/19 (32%)
zf-H2C2_2 251..273 CDD:290200 10/21 (48%)
C2H2 Zn finger 264..284 CDD:275368 5/19 (26%)
zf-H2C2_2 277..301 CDD:290200 13/23 (57%)
C2H2 Zn finger 292..312 CDD:275368 6/19 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 84 1.000 Inparanoid score I1804
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.960

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