DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Paris and Nnk

DIOPT Version :10

Sequence 1:NP_608840.1 Gene:Paris / 33657 FlyBaseID:FBgn0031610 Length:346 Species:Drosophila melanogaster
Sequence 2:NP_650659.2 Gene:Nnk / 42143 FlyBaseID:FBgn0038549 Length:439 Species:Drosophila melanogaster


Alignment Length:425 Identity:96/425 - (22%)
Similarity:145/425 - (34%) Gaps:141/425 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAEICRVCMDI--SGKLVNIFDARRRTRVSIAEMIAQCTGFEVKRGDLFSEMICPQCYEDVKSAY 63
            |...||:|.|:  :...|||||...:    :...||..||..:.........:|..|...:|||.
  Fly     1 MTPQCRLCGDLIYTQNPVNIFDENSK----MVRQIALVTGLWLTDHSKMPRNMCSCCLLSLKSAI 61

  Fly    64 GIRQTC--------------------------------------------------------EES 72
            ..||.|                                                        ||.
  Fly    62 AFRQACIKTNNRLTIQRRSVEAKDDGCWADPLSDAHEGLKINDAEVEQEVLYEVSYADNEGLEED 126

  Fly    73 HQFYCRVRDEG-------IEDALCAL--------------------------------------- 91
            |..|.:..:|.       .||..|.:                                       
  Fly   127 HDLYKKEEEESEVNENKEFEDIACEIPFSKEDDEQEQQQEYEDMVDKKTGHDDGEESQECEESQP 191

  Fly    92 ------LEEEDWEISEDEDARI----DSASAADDDGKSD----SKKVAF-ECRECHKKYQRKGT- 140
                  ..|||.|.|:::|..:    |..|..|.|..||    |::.|. |.::..:||.::.: 
  Fly   192 DEEESQQNEEDEEESQEDDDELWQNEDGDSDTDADSMSDIEATSRQSALDEDKKPRRKYTKRSSP 256

  Fly   141 ------FL----RHMRTHMDGQSFPCPYCKRNFRLRVTLKAHMKTHNAAKPYECSHCAKTFAQQS 195
                  ||    :..:|::..:...|.:|.:.|..:.....|:..|:..||:||..|.:....:.
  Fly   257 KNDDTDFLKPAKKKRKTYISQKVHICDHCGKKFTDKGNFNLHVLRHSGVKPFECPECGQKEFNRY 321

  Fly   196 TLQSHERT-HTGERPFKCSQCSKTFIKSSDLRRH-IRTHGSERP---FKCSKCTKTFTRKFHLDN 255
            .|..|.|. |.||:|:.|..|.:.|:.|:...|| .|.|.:::.   |||:.|.|.:...:....
  Fly   322 ILNIHIRVKHRGEKPYACQFCDERFVHSTMRSRHENRVHRNKKTPKNFKCNYCDKRYESNYQRAK 386

  Fly   256 HFRSHTGERPFKCSHCPKAFAMKQHLKQH--SRLH 288
            |...|||||.|.|..|..:|....:||.|  ||.|
  Fly   387 HEVVHTGERNFHCEVCKVSFTRNSNLKTHYRSRQH 421

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ParisNP_608840.1 zf-AD 4..78 CDD:462262 25/131 (19%)
C2H2 Zn finger 128..148 CDD:275368 4/30 (13%)
C2H2 Zn finger 156..176 CDD:275368 4/19 (21%)
COG5048 <180..341 CDD:227381 41/116 (35%)
C2H2 Zn finger 184..204 CDD:275368 5/20 (25%)
C2H2 Zn finger 212..232 CDD:275368 7/20 (35%)
C2H2 Zn finger 240..260 CDD:275368 4/19 (21%)
C2H2 Zn finger 268..288 CDD:275368 8/21 (38%)
C2H2 Zn finger 296..316 CDD:275368
C2H2 Zn finger 324..341 CDD:275368
NnkNP_650659.2 zf-AD 4..74 CDD:214871 21/73 (29%)
C2H2 Zn finger 282..302 CDD:275368 4/19 (21%)
C2H2 Zn finger 310..331 CDD:275368 5/20 (25%)
C2H2 Zn finger 339..360 CDD:275368 7/20 (35%)
C2H2 Zn finger 371..388 CDD:275370 3/16 (19%)
zf-met 397..421 CDD:463736 9/23 (39%)
C2H2 Zn finger 399..417 CDD:275368 6/17 (35%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.