DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15436 and ranshi

DIOPT Version :9

Sequence 1:NP_608840.1 Gene:CG15436 / 33657 FlyBaseID:FBgn0031610 Length:346 Species:Drosophila melanogaster
Sequence 2:NP_649824.1 Gene:ranshi / 41041 FlyBaseID:FBgn0037620 Length:346 Species:Drosophila melanogaster


Alignment Length:340 Identity:91/340 - (26%)
Similarity:140/340 - (41%) Gaps:87/340 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 EICRVCMDISGK------LVNIFDARRRTRVSIAEMIAQCTGFEVKRGDLFSEMICPQCYEDVKS 61
            ::||.|    ||      .:|||:.|.:|.:   |.|...||..:|........:|..|...::.
  Fly     4 KVCRTC----GKRTNAERSLNIFEKRNQTTL---EHIKLLTGAVLKNCSTLPNRLCASCQTCLQQ 61

  Fly    62 AYGIRQTCEESHQFYCRVRDEGIEDAL--C-----ALLEEEDWE--------------------- 98
            |...|:.|.|..:.....:|:  ||.|  |     ::||:|:.|                     
  Fly    62 AISFRERCLEVQRELLHSQDD--EDFLRICQESPKSVLEQEELELDLAEISIEVERLDDLNEGPI 124

  Fly    99 ---------------ISEDE-------------------DARIDSASAADDDGKSDSKK------ 123
                           |:|||                   |..:|:......|.::..|:      
  Fly   125 QSSGFKVEDILNESKINEDEPNNEDDIDYSEMDYLIYESDTEVDAKQELKSDSENPKKRRNRRNP 189

  Fly   124 ----VAFECRECHKKYQRKGTFLRHMRTHMDGQSFPCPYCKRNFRLRVTLKAHMKTHNAAKPYEC 184
                ..|.|.||....:.:.:|:.|.:.|...:.|.|.:|:..|.....||.|::.|...||::|
  Fly   190 RDSNRTFFCEECGNHIKDRISFILHCKRHRGVKEFGCEFCEDRFCTPAELKRHIRKHTGEKPFKC 254

  Fly   185 SHCAKTFAQQSTLQSHERTHTGERPFKCSQCSKTFIKSSDLRRHIRTHGSERPFKCSKCTKTFTR 249
            .||:::|:..||...||||||.||||.|.:|:..|..|..|:.|:..|..|:.|:|..|.|.|:|
  Fly   255 RHCSRSFSDYSTRLKHERTHTNERPFVCKECNNAFTTSYILKNHMLVHTGEKAFRCDLCDKLFSR 319

  Fly   250 KFHLDNHFRSHTGER 264
            ..||..|:||:...|
  Fly   320 YTHLTTHYRSNAHRR 334

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15436NP_608840.1 zf-AD 4..78 CDD:285071 21/79 (27%)
C2H2 Zn finger 128..148 CDD:275368 5/19 (26%)
C2H2 Zn finger 156..176 CDD:275368 6/19 (32%)
COG5048 <180..341 CDD:227381 38/85 (45%)
C2H2 Zn finger 184..204 CDD:275368 9/19 (47%)
zf-H2C2_2 197..219 CDD:290200 12/21 (57%)
C2H2 Zn finger 212..232 CDD:275368 6/19 (32%)
zf-H2C2_2 224..249 CDD:290200 9/24 (38%)
C2H2 Zn finger 240..260 CDD:275368 9/19 (47%)
zf-H2C2_2 252..276 CDD:290200 6/13 (46%)
C2H2 Zn finger 268..288 CDD:275368
C2H2 Zn finger 296..316 CDD:275368
C2H2 Zn finger 324..341 CDD:275368
ranshiNP_649824.1 zf-AD 5..77 CDD:214871 21/78 (27%)
C2H2 Zn finger 198..218 CDD:275368 5/19 (26%)
COG5048 222..>276 CDD:227381 21/53 (40%)
C2H2 Zn finger 226..246 CDD:275368 6/19 (32%)
zf-H2C2_2 238..262 CDD:290200 9/23 (39%)
C2H2 Zn finger 254..274 CDD:275368 9/19 (47%)
zf-H2C2_2 269..291 CDD:290200 13/21 (62%)
C2H2 Zn finger 282..302 CDD:275368 6/19 (32%)
zf-H2C2_2 295..319 CDD:290200 9/23 (39%)
C2H2 Zn finger 310..328 CDD:275368 8/17 (47%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 84 1.000 Inparanoid score I1804
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.960

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