DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15436 and nom

DIOPT Version :9

Sequence 1:NP_608840.1 Gene:CG15436 / 33657 FlyBaseID:FBgn0031610 Length:346 Species:Drosophila melanogaster
Sequence 2:NP_001262384.1 Gene:nom / 41038 FlyBaseID:FBgn0037617 Length:370 Species:Drosophila melanogaster


Alignment Length:344 Identity:78/344 - (22%)
Similarity:123/344 - (35%) Gaps:104/344 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAEICRVC--MDISGKLVNIFDARRRTRVSIAEMIAQCTGFEVKRGDLFSEMICPQCYEDVKSAY 63
            :..:||||  ..:..|.|.:|...|:   .|...|...||..:::.....:|:|..|..|::||.
  Fly     2 LINVCRVCGRSRLCPKAVELFKPGRQ---DILRRIQLITGILLQQIPNAPDMVCFCCQTDLQSAM 63

  Fly    64 GIRQTCEESHQFYCRVRDEGIEDALCALLEEEDW------------------------------- 97
            ..|:.|                     :|:::.|                               
  Fly    64 IFRRQC---------------------ILQQKKWVPLLQSDKVGASEEKKVEPNDPSTKKKTTKR 107

  Fly    98 -------------------------------------EISE-----DEDARIDSASAADDDGKSD 120
                                                 |||.     |.|..::.....|:||...
  Fly   108 RRGRPRMPLEIVDIVVTNESKASAGESVGGDEFDQPVEISNEPDATDSDVNLEEIDLPDEDGLES 172

  Fly   121 SKKV----AFECRECHKKYQRKGTFLRHMRTHMDGQSFPCPYCKRNFRLRVTLKAHMKTHNAAK- 180
            ...:    ..:|..|......|.:.:||...|...:.:||..|.:.|.:...||||..||:..: 
  Fly   173 DHDLPNVQIHKCDTCGIIKNNKSSLVRHQFEHNGIRPYPCKECPKTFLVASELKAHNLTHHTLEP 237

  Fly   181 PYECSHCAKTFAQQSTLQSHERTHTGERPFKCSQCSKTFIKSSDLRRHIRTHGSERPFKCSKCTK 245
            |:.|.:|.:.:......:.|||.||.||||.|.||.|.|.::..|:.|:..|...|.:.|..|.:
  Fly   238 PFACRYCDRRYFSVVGRKKHERVHTNERPFVCDQCGKAFTRTCILKAHMAVHQVVRKYSCDVCDR 302

  Fly   246 TFTRKFHLDNHFRSHTGER 264
            :|:.|.||..||.|:|.:|
  Fly   303 SFSLKKHLATHFISNTHKR 321

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15436NP_608840.1 zf-AD 4..78 CDD:285071 20/75 (27%)
C2H2 Zn finger 128..148 CDD:275368 5/19 (26%)
C2H2 Zn finger 156..176 CDD:275368 7/19 (37%)
COG5048 <180..341 CDD:227381 32/86 (37%)
C2H2 Zn finger 184..204 CDD:275368 5/19 (26%)
zf-H2C2_2 197..219 CDD:290200 13/21 (62%)
C2H2 Zn finger 212..232 CDD:275368 7/19 (37%)
zf-H2C2_2 224..249 CDD:290200 7/24 (29%)
C2H2 Zn finger 240..260 CDD:275368 8/19 (42%)
zf-H2C2_2 252..276 CDD:290200 7/13 (54%)
C2H2 Zn finger 268..288 CDD:275368
C2H2 Zn finger 296..316 CDD:275368
C2H2 Zn finger 324..341 CDD:275368
nomNP_001262384.1 zf-AD 5..76 CDD:214871 21/94 (22%)
C2H2 Zn finger 184..204 CDD:275368 5/19 (26%)
C2H2 Zn finger 212..261 CDD:275368 15/48 (31%)
zf-H2C2_2 255..278 CDD:290200 14/22 (64%)
C2H2 Zn finger 269..289 CDD:275368 7/19 (37%)
zf-H2C2_2 282..305 CDD:290200 6/22 (27%)
C2H2 Zn finger 297..313 CDD:275368 6/15 (40%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 84 1.000 Inparanoid score I1804
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.960

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