DRSC/TRiP Functional Genomics Resources

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Protein Alignment Paris and Neu2

DIOPT Version :10

Sequence 1:NP_608840.1 Gene:Paris / 33657 FlyBaseID:FBgn0031610 Length:346 Species:Drosophila melanogaster
Sequence 2:NP_649316.1 Gene:Neu2 / 40375 FlyBaseID:FBgn0037085 Length:382 Species:Drosophila melanogaster


Alignment Length:344 Identity:117/344 - (34%)
Similarity:169/344 - (49%) Gaps:41/344 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 LVNIFDARRRTRVSIAEMIAQCTGFEVKRGDLFSEMICPQCYEDVKSAYGIRQTCEESHQFYCRV 79
            :.::||......:|||.:|.:|||::|::.|..|..||..|.||.::|:.|.:|.|.|||||..:
  Fly     1 MASVFDESHEPGLSIAYIIYKCTGWQVEKHDPLSNTICKSCLEDAQNAFDIIETYERSHQFYRFL 65

  Fly    80 RDEGIEDALCALLEEEDWEISED-EDARIDSASAADDDGKSDSKKVAFECRECHKKYQRKGTFLR 143
            :|...|::     |.:....||: |.|..|....|||....:...:    .||..|.:.|     
  Fly    66 KDVREEES-----ENDGSGCSEEVEAAERDLQDGADDVDSGNEPDI----NECDIKAKEK----- 116

  Fly   144 HMRTHMDGQSFPCPYCKRNFRLRVTLKAHMKTHNAAKPYECSHCAKTFAQQSTLQSHERTHTGER 208
                    ..|.|.:|.::|:::..||.||::|...:|:.||.|.|:|...|.||:|.|||||||
  Fly   117 --------PGFSCSHCPKSFQVKSNLKVHMRSHTGERPFTCSLCPKSFGYSSGLQNHMRTHTGER 173

  Fly   209 PFKCSQCSKTFIKSSDLRRHIRTHGSERPFKCSKCTKTFTRKFHLDNHFRSHTGERPFKCSHCPK 273
            ||:||.|.::|.....|:.||:.|......:|..|.|.|.....|..|..:||.|..||||.|.|
  Fly   174 PFQCSHCPRSFTAGHHLKAHIQMHERRGSLRCPYCQKCFLTSLILKQHLATHTDETQFKCSQCSK 238

  Fly   274 AFAMKQHLKQHSRLHLPDRPFRCSHCPKTFRLSSTLKEHKLVHNA----------------ERTF 322
            :|.::..|..|.|:| .:|.|.|.||.|.|.|.:.||.| |..||                .:..
  Fly   239 SFQVEHELWMHMRVH-QERLFTCGHCSKDFALHAYLKRH-LSRNARCSQSSKASAHKTLGHSKAL 301

  Fly   323 KCPHCASFYKQRKTLARHI 341
            ||..|...:..|..|:.|:
  Fly   302 KCGKCPKTFTDRSALSTHL 320

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ParisNP_608840.1 zf-AD 4..78 CDD:462262 26/62 (42%)
C2H2 Zn finger 128..148 CDD:275368 4/19 (21%)
C2H2 Zn finger 156..176 CDD:275368 7/19 (37%)
COG5048 <180..341 CDD:227381 66/176 (38%)
C2H2 Zn finger 184..204 CDD:275368 10/19 (53%)
C2H2 Zn finger 212..232 CDD:275368 7/19 (37%)
C2H2 Zn finger 240..260 CDD:275368 6/19 (32%)
C2H2 Zn finger 268..288 CDD:275368 8/19 (42%)
C2H2 Zn finger 296..316 CDD:275368 10/19 (53%)
C2H2 Zn finger 324..341 CDD:275368 4/16 (25%)
Neu2NP_649316.1 zf-AD 1..63 CDD:462262 25/61 (41%)
COG5048 <119..241 CDD:227381 51/121 (42%)
C2H2 Zn finger 121..141 CDD:275368 7/19 (37%)
zf-H2C2_2 133..156 CDD:463886 10/22 (45%)
C2H2 Zn finger 149..169 CDD:275368 10/19 (53%)
zf-H2C2_2 162..185 CDD:463886 15/22 (68%)
C2H2 Zn finger 177..197 CDD:275368 7/19 (37%)
C2H2 Zn finger 205..225 CDD:275368 6/19 (32%)
zf-C2H2_8 206..286 CDD:464935 33/81 (41%)
C2H2 Zn finger 233..253 CDD:275368 8/19 (42%)
C2H2 Zn finger 260..297 CDD:275368 12/37 (32%)
C2H2 Zn finger 303..323 CDD:275368 5/18 (28%)
C2H2 Zn finger 353..373 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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