DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG15436 and ZNF470

DIOPT Version :9

Sequence 1:NP_608840.1 Gene:CG15436 / 33657 FlyBaseID:FBgn0031610 Length:346 Species:Drosophila melanogaster
Sequence 2:NP_001001668.3 Gene:ZNF470 / 388566 HGNCID:22220 Length:717 Species:Homo sapiens


Alignment Length:392 Identity:110/392 - (28%)
Similarity:183/392 - (46%) Gaps:66/392 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 CRVCMDISGKLVNIFDARRRTRVSIAEMIAQCTGFEVKRGDLFSEMI----------------CP 53
            |..|..|..|:..:   ....|:...|...:|    ::.|..||:..                |.
Human   230 CNDCEKIFSKISTL---TLHQRIHTGEKPYEC----IECGKAFSQSAHLAQHQRIHTGEKPFECT 287

  Fly    54 QCYEDV-KSAYGIR----QTCEESHQFYCRVRDEGIEDALCALLE-------EEDWEISEDEDAR 106
            :|.:.. ::|:.::    .|.|:.:|  |:..::.... |..|.:       |:.:|..|...|.
Human   288 ECGKAFSQNAHLVQHQRVHTGEKPYQ--CKQCNKAFSQ-LAHLAQHQRVHTGEKPYECIECGKAF 349

  Fly   107 IDSASAAD--------------DDGKSDSKKVA--------------FECRECHKKYQRKGTFLR 143
            .|.:|.|.              |.||:..:..:              |:|.:|.|.:......::
Human   350 SDCSSLAHHRRIHTGKRPYECIDCGKAFRQNASLIRHRRYYHTGEKPFDCIDCGKAFTDHIGLIQ 414

  Fly   144 HMRTHMDGQSFPCPYCKRNFRLRVTLKAHMKTHNAAKPYECSHCAKTFAQQSTLQSHERTHTGER 208
            |.|||...:.:.|..|.:.|....:|..|.:.|...|||||:.|.|.|:.:.:|..|:|.||||:
Human   415 HKRTHTGERPYKCNVCGKAFSHGSSLTVHQRIHTGEKPYECNICEKAFSHRGSLTLHQRVHTGEK 479

  Fly   209 PFKCSQCSKTFIKSSDLRRHIRTHGSERPFKCSKCTKTFTRKFHLDNHFRSHTGERPFKCSHCPK 273
            |::|.:|.|.|.:|:.|..|.|.|..|:|::|.:|:|||::..||..|.:.||||:|::|..|.|
Human   480 PYECKECGKAFRQSTHLAHHQRIHTGEKPYECKECSKTFSQNAHLAQHQKIHTGEKPYECKECGK 544

  Fly   274 AFAMKQHLKQHSRLHLPDRPFRCSHCPKTFRLSSTLKEHKLVHNAERTFKCPHCASFYKQRKTLA 338
            ||:...||.||.|:|..::|:.|..|.|.|...|.|.:|:.:|:.:|.::|..|...::||.:|.
Human   545 AFSQIAHLVQHQRVHTGEKPYECIECGKAFSDGSYLVQHQRLHSGKRPYECLECGKAFRQRASLI 609

  Fly   339 RH 340
            .|
Human   610 CH 611

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15436NP_608840.1 zf-AD 4..78 CDD:285071 16/93 (17%)
C2H2 Zn finger 128..148 CDD:275368 5/19 (26%)
C2H2 Zn finger 156..176 CDD:275368 5/19 (26%)
COG5048 <180..341 CDD:227381 67/161 (42%)
C2H2 Zn finger 184..204 CDD:275368 7/19 (37%)
zf-H2C2_2 197..219 CDD:290200 11/21 (52%)
C2H2 Zn finger 212..232 CDD:275368 8/19 (42%)
zf-H2C2_2 224..249 CDD:290200 11/24 (46%)
C2H2 Zn finger 240..260 CDD:275368 8/19 (42%)
zf-H2C2_2 252..276 CDD:290200 12/23 (52%)
C2H2 Zn finger 268..288 CDD:275368 10/19 (53%)
C2H2 Zn finger 296..316 CDD:275368 7/19 (37%)
C2H2 Zn finger 324..341 CDD:275368 6/17 (35%)
ZNF470NP_001001668.3 KRAB 23..83 CDD:214630
KRAB 23..62 CDD:279668
Nuclear localization signal. /evidence=ECO:0000255 216..219
C2H2 Zn finger 230..250 CDD:275368 5/22 (23%)
zf-H2C2_2 243..267 CDD:290200 5/30 (17%)
COG5048 254..669 CDD:227381 104/365 (28%)
C2H2 Zn finger 258..278 CDD:275368 4/23 (17%)
zf-H2C2_2 270..295 CDD:290200 2/24 (8%)
C2H2 Zn finger 286..306 CDD:275368 3/19 (16%)
zf-H2C2_2 298..323 CDD:290200 4/26 (15%)
C2H2 Zn finger 314..334 CDD:275368 3/20 (15%)
zf-H2C2_2 326..350 CDD:290200 5/23 (22%)
C2H2 Zn finger 342..362 CDD:275368 5/19 (26%)
zf-H2C2_2 354..379 CDD:290200 5/24 (21%)
C2H2 Zn finger 370..388 CDD:275368 3/17 (18%)
Nuclear localization signal. /evidence=ECO:0000255 385..388 0/2 (0%)
C2H2 Zn finger 399..419 CDD:275368 5/19 (26%)
zf-H2C2_2 412..436 CDD:290200 7/23 (30%)
C2H2 Zn finger 427..447 CDD:275368 5/19 (26%)
zf-H2C2_2 439..464 CDD:290200 11/24 (46%)
C2H2 Zn finger 455..475 CDD:275368 7/19 (37%)
zf-H2C2_2 467..492 CDD:290200 12/24 (50%)
C2H2 Zn finger 483..503 CDD:275368 8/19 (42%)
zf-H2C2_2 495..520 CDD:290200 11/24 (46%)
C2H2 Zn finger 511..531 CDD:275368 8/19 (42%)
zf-H2C2_2 523..548 CDD:290200 13/24 (54%)
C2H2 Zn finger 539..559 CDD:275368 10/19 (53%)
zf-H2C2_2 551..575 CDD:290200 10/23 (43%)
C2H2 Zn finger 567..587 CDD:275368 7/19 (37%)
C2H2 Zn finger 595..615 CDD:275368 6/17 (35%)
zf-H2C2_2 607..632 CDD:290200 2/5 (40%)
C2H2 Zn finger 623..643 CDD:275368
zf-H2C2_2 635..660 CDD:290200
C2H2 Zn finger 651..671 CDD:275368
zf-H2C2_2 663..688 CDD:290200
C2H2 Zn finger 679..699 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.