DRSC/TRiP Functional Genomics Resources

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Protein Alignment Paris and L

DIOPT Version :10

Sequence 1:NP_608840.1 Gene:Paris / 33657 FlyBaseID:FBgn0031610 Length:346 Species:Drosophila melanogaster
Sequence 2:NP_001188929.1 Gene:L / 36609 FlyBaseID:FBgn0288433 Length:1366 Species:Drosophila melanogaster


Alignment Length:275 Identity:50/275 - (18%)
Similarity:78/275 - (28%) Gaps:113/275 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly    89 SKMKRSPRFPSFDSQSSLSDFADDRFG--SIYQS----RSNGSFSSD----------------YP 131
            :|.|..|:.|.....:.|. ..|||:|  .|.|:    |:..|..||                .|
  Fly    25 AKQKGGPKPPEVQHTAPLV-VCDDRYGKRQIQQNWTEERNLPSSDSDTEDEQLLAADFEKLLELP 88

  Fly   132 AAGGGVGGSATAGGGLREDAN--GMEQLGEQVELLR-------------------GYVQRSYSNF 175
            |:.......::....|:.|.:  |.::.....|..|                   ||.:..:|..
  Fly    89 ASSASHFLLSSEKRWLQPDTDLPGEDEKNRFSEYFRIDTKLLNASLGCIPFYERHGYDETLFSTL 153

  Fly   176 DL-------------------DSPGSSAAVAAVDRRNELEMHNEPPGR----------------- 204
            :|                   |...||..|..|.::::..|  .||.|                 
  Fly   154 ELNLMRQKAEIHTNKFQQTFADQLSSSVKVGPVSQKHKENM--PPPPRKPQPTPCFVGKFANPKL 216

  Fly   205 -GLVGAA--------------------------EFSAALPDFVQ--DHLVMEQWYNTLPKGTGSG 240
             ..||..                          |.|..:|..|.  :..:.....|..|:|:|..
  Fly   217 DDSVGGTETKQLHASKEPVKPVEAKLSELKIEPEVSKTVPKIVPKVEPTIATTSTNPSPQGSGKD 281

  Fly   241 SSGSAE--FDDVLDL 253
            |....:  .||:||:
  Fly   282 SKEDIQQWLDDILDI 296

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ParisNP_608840.1 zf-AD 4..78 CDD:462262
C2H2 Zn finger 128..148 CDD:275368 4/35 (11%)
C2H2 Zn finger 156..176 CDD:275368 5/38 (13%)
COG5048 <180..341 CDD:227381 23/122 (19%)
C2H2 Zn finger 184..204 CDD:275368 5/19 (26%)
C2H2 Zn finger 212..232 CDD:275368 3/21 (14%)
C2H2 Zn finger 240..260 CDD:275368 5/16 (31%)
C2H2 Zn finger 268..288 CDD:275368
C2H2 Zn finger 296..316 CDD:275368
C2H2 Zn finger 324..341 CDD:275368
LNP_001188929.1 C2H2 Zn finger 294..314 CDD:275368 2/3 (67%)
C2H2 Zn finger 322..342 CDD:275368
COG5048 336..769 CDD:227381
C2H2 Zn finger 350..370 CDD:275368
C2H2 Zn finger 378..398 CDD:275368
C2H2 Zn finger 630..650 CDD:275368
C2H2 Zn finger 659..679 CDD:275368
C2H2 Zn finger 689..707 CDD:275368
C2H2 Zn finger 1020..1041 CDD:275368
C2H2 Zn finger 1049..1069 CDD:275368
C2H2 Zn finger 1197..1217 CDD:275368
C2H2 Zn finger 1229..1246 CDD:275368
C2H2 Zn finger 1258..1278 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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