DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15436 and prg

DIOPT Version :9

Sequence 1:NP_608840.1 Gene:CG15436 / 33657 FlyBaseID:FBgn0031610 Length:346 Species:Drosophila melanogaster
Sequence 2:NP_001260253.1 Gene:prg / 34177 FlyBaseID:FBgn0285971 Length:558 Species:Drosophila melanogaster


Alignment Length:449 Identity:113/449 - (25%)
Similarity:188/449 - (41%) Gaps:109/449 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 CRVC-MDISGKLVNIFD--ARRRTRVSIAEMIAQCTGFEVKRGDLFSEMICPQCYEDVKSAYGIR 66
            ||:| .:.....:||||  .:....|||||:.......:..|.:..||:||.:|.|.::.|:.:|
  Fly    17 CRLCHHNTDPNSLNIFDDTVQFCKDVSIAEVSKSLWSVQYDRNECLSELICSRCLEILEEAFELR 81

  Fly    67 QTCEESHQFYCRVRDEGIED------------------ALCALL--------------------- 92
            :..:|..|.......|.|:|                  ..|.::                     
  Fly    82 KGMQEREQSLQEQLKEMIKDHPKHRPGLNGNPGVFVPEEGCIIVEVDPENLAESSEEEFALGSDG 146

  Fly    93 -----------EEEDWEISEDEDAR----------IDSA------SAADDDGKSDSK-KVAFECR 129
                       ||||::..::||.:          :|:|      |.|::...:::: |.||.|:
  Fly   147 EYENYDDDDEEEEEDYDEEDEEDGQNGEDVDMPLGMDAAQMAAQQSVANNANTTEARPKRAFLCQ 211

  Fly   130 ECHKKYQRKGTFLRH-MRTHMDGQSFPCPYCKRNFRLRVTLKAHMKT-HNAAKPYECSHCAKTFA 192
            .|...:........| :..|.....:.|.:|......|..|.:|:|| |:..:||.|:||.|.|.
  Fly   212 YCDLGFTLPAECQEHELAAHDPNAPYCCNFCNIKLVTRPALISHIKTLHDPDRPYVCAHCRKGFV 276

  Fly   193 QQSTLQSHERTHTGERPFKCSQCSKTFIKSSDLRRHIRTHGSERPFKCSKCTKTFTRKFHLDNHF 257
            ::|.|:.|...|||.|||.|:.|||:|.::::|.:|:|.|...:||.|.:|.::|.....:..|.
  Fly   277 RRSDLKKHTIVHTGVRPFTCNVCSKSFSRNTNLTKHMRIHSGVKPFVCQQCPRSFQTAVEMMRHT 341

  Fly   258 RSHTGERPFKCSHCPKAFAMKQHLKQHSRLH-------------LP------------------- 290
            |||...:.|:|..||.:|:.:..|..|.::|             :|                   
  Fly   342 RSHGEVKAFQCGRCPYSFSRRDKLIAHQQVHTRRDMEQQQQMGLIPPMEGDLQQQALQAKQKAAA 406

  Fly   291 ----DRPFRCSHCPKTFRLSSTLKEHKLVHNAERTFKCPHCASFYKQRKTLARHILEIH 345
                .|.:.|..|.:||:....|:.|:.:| .:..|.|..|...:.:|:.|.||.||.|
  Fly   407 QTKNSRYYHCDVCDRTFQRERDLQRHQALH-MDSLFACKTCNQGFNRREQLQRHELEAH 464

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15436NP_608840.1 zf-AD 4..78 CDD:285071 23/75 (31%)
C2H2 Zn finger 128..148 CDD:275368 3/20 (15%)
C2H2 Zn finger 156..176 CDD:275368 7/20 (35%)
COG5048 <180..341 CDD:227381 57/196 (29%)
C2H2 Zn finger 184..204 CDD:275368 8/19 (42%)
zf-H2C2_2 197..219 CDD:290200 12/21 (57%)
C2H2 Zn finger 212..232 CDD:275368 8/19 (42%)
zf-H2C2_2 224..249 CDD:290200 9/24 (38%)
C2H2 Zn finger 240..260 CDD:275368 5/19 (26%)
zf-H2C2_2 252..276 CDD:290200 8/23 (35%)
C2H2 Zn finger 268..288 CDD:275368 6/19 (32%)
C2H2 Zn finger 296..316 CDD:275368 6/19 (32%)
C2H2 Zn finger 324..341 CDD:275368 5/16 (31%)
prgNP_001260253.1 zf-AD 16..94 CDD:285071 23/76 (30%)
COG5048 <212..340 CDD:227381 41/127 (32%)
C2H2 Zn finger 239..260 CDD:275368 7/20 (35%)
C2H2 Zn finger 268..288 CDD:275368 8/19 (42%)
zf-H2C2_2 280..305 CDD:290200 13/24 (54%)
zf-C2H2 294..316 CDD:278523 9/21 (43%)
C2H2 Zn finger 296..316 CDD:275368 8/19 (42%)
zf-H2C2_2 308..331 CDD:290200 8/22 (36%)
C2H2 Zn finger 324..344 CDD:275368 5/19 (26%)
C2H2 Zn finger 352..372 CDD:275368 6/19 (32%)
C2H2 Zn finger 416..436 CDD:275368 6/19 (32%)
C2H2 Zn finger 443..464 CDD:275368 8/20 (40%)
C2H2 Zn finger 470..490 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 91 1.000 Inparanoid score I2264
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.050

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