DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Paris and CG18262

DIOPT Version :10

Sequence 1:NP_608840.1 Gene:Paris / 33657 FlyBaseID:FBgn0031610 Length:346 Species:Drosophila melanogaster
Sequence 2:NP_572453.1 Gene:CG18262 / 31745 FlyBaseID:FBgn0030012 Length:469 Species:Drosophila melanogaster


Alignment Length:343 Identity:96/343 - (27%)
Similarity:139/343 - (40%) Gaps:36/343 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 IAEMIAQCTGFEVKRGDLFSEMICPQCYEDVKSAYGIRQTCEESHQFYCRVRDEGIEDALCALLE 93
            ||:.:.:..|.|....:|..|.......|:.:...|.::   :.:|....:::..:|.....|..
  Fly    72 IAQDVVEVQGNEELHEELAKEASPDLEEEEEEKEEGSKR---QHYQRAAAMKNTLVETREDLLDI 133

  Fly    94 EEDW---EISEDEDARIDSASAADDDGKSDS---KKVAFECRECHKKYQRKGTFLRHMR---THM 149
            |.||   |.||..:...:....:|||...||   |.:.|:|.:|.:.|..|.:...|.|   :..
  Fly   134 ELDWTGGEQSEHNETHEEEEGESDDDDTKDSNDTKDMLFQCDQCDRAYNTKRSLQSHRRLKHSEA 198

  Fly   150 DGQSF---------------PCPY------CKRNFRLRVTLKAHMKTHNAAKPYECSHCAKTFAQ 193
            :|.|.               |..|      |.:.||....|:.|...|..   ..|..|.|.|.|
  Fly   199 NGGSLDKSASERNSKKRKGPPKVYKCNEEACNQTFRTERDLRGHRWKHTG---IFCDICGKPFTQ 260

  Fly   194 QSTLQSHERTHTGERPFKCSQCSKTFIKSSDLRRHIRTHGSERPFKCSKCTKTFTRKFHLDNHFR 258
            ...:..|.:.|:|.:|.||.:|..||....:|..|...|....|..|..|.:....:..|..|.|
  Fly   261 SGNMMRHRQRHSGIKPHKCPECDATFYTQKELSSHSICHTGRMPCICEVCGRPCRDRGVLTAHMR 325

  Fly   259 SHTGERPFKCSHCPKAFAMKQHLKQHSRLHLPDRPFRCSHCPKTFRLSSTLKEHKLVHNAERTFK 323
            .||||||.||..|.|||.....|..|:..|...|||.|..|..||:....|:.|||:|:.:|.:.
  Fly   326 RHTGERPAKCEVCGKAFYSFHDLNVHAVSHTNLRPFVCDVCGSTFQRKKALRVHKLLHSEQRKYA 390

  Fly   324 CPHCASFYKQRKTLARHI 341
            |..|...:.|...|..|:
  Fly   391 CKLCGKTFAQSGGLNAHM 408

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ParisNP_608840.1 zf-AD 4..78 CDD:462262 9/48 (19%)
C2H2 Zn finger 128..148 CDD:275368 6/22 (27%)
C2H2 Zn finger 156..176 CDD:275368 6/25 (24%)
COG5048 <180..341 CDD:227381 55/160 (34%)
C2H2 Zn finger 184..204 CDD:275368 6/19 (32%)
C2H2 Zn finger 212..232 CDD:275368 6/19 (32%)
C2H2 Zn finger 240..260 CDD:275368 5/19 (26%)
C2H2 Zn finger 268..288 CDD:275368 7/19 (37%)
C2H2 Zn finger 296..316 CDD:275368 8/19 (42%)
C2H2 Zn finger 324..341 CDD:275368 4/16 (25%)
CG18262NP_572453.1 COG5236 <222..>313 CDD:227561 27/93 (29%)
C2H2 Zn finger 224..246 CDD:275368 5/21 (24%)
C2H2 Zn finger 251..271 CDD:275368 6/19 (32%)
zf-H2C2_2 263..288 CDD:463886 9/24 (38%)
C2H2 Zn finger 279..327 CDD:275368 13/47 (28%)
zf-H2C2_2 320..342 CDD:463886 13/21 (62%)
C2H2 Zn finger 335..355 CDD:275368 7/19 (37%)
C2H2 Zn finger 363..383 CDD:275368 8/19 (42%)
zf-C2H2 389..411 CDD:395048 5/20 (25%)
C2H2 Zn finger 391..411 CDD:275368 5/18 (28%)

Return to query results.
Submit another query.