DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG15436 and CG2120

DIOPT Version :9

Sequence 1:NP_608840.1 Gene:CG15436 / 33657 FlyBaseID:FBgn0031610 Length:346 Species:Drosophila melanogaster
Sequence 2:NP_572446.2 Gene:CG2120 / 31737 FlyBaseID:FBgn0030005 Length:315 Species:Drosophila melanogaster


Alignment Length:334 Identity:87/334 - (26%)
Similarity:133/334 - (39%) Gaps:56/334 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 DLFSEMICPQCYEDVKSAYGIRQTCEESHQFYCRVRD---EGIEDALCALLEEEDWEISEDEDAR 106
            |..|:|......:|....|.:   |.|..|.:.::.|   |.:...:..|....::::.|..:..
  Fly     5 DPVSQMANATLADDDLGNYDV---CLEDLQLFAQLEDLSGERLPMEMELLNPGSEYDLLELVNGA 66

  Fly   107 IDSASAADDDGKSDSKKVAFECRECHK-----KYQRKGTFLRHMRTHMDGQSFPCPYCKRNFRLR 166
            :...:..:                 ||     |.:|..|..||..|   |:...|..|.|.|...
  Fly    67 LQQRNTTE-----------------HKPTDMCKPKRTPTTKRHRTT---GKDHTCDICDRRFSEA 111

  Fly   167 VTLKAHMKTHNAAKPYECSHCAKTFAQQSTLQSHERTHTGERPFKCSQCSKTFIKSSDLRRHIRT 231
            ..|:.|..||...||:.|..|.|.|.|.:.|:.|..|||.|||.||..|.|.|..::.|..|.|.
  Fly   112 YNLRIHKMTHTDEKPHVCVECGKGFRQLNKLRIHAVTHTAERPHKCDICGKGFRYANYLTVHRRL 176

  Fly   232 HGSERPFKC--SKCTKTF----TRKFHLDNHFRSHTGERP----------------FKCSHCPKA 274
            |..|:|:.|  :.|..:|    .|:.|......:.|...|                |.|..|.:.
  Fly   177 HTGEKPYPCLATDCHLSFHSIHARRIHTKLRHAAQTDPDPEHPLAEQEQRDTSALSFTCPVCSRV 241

  Fly   275 FAMKQHLKQHSRLHLPDRPFRC--SHCPKTFRLSSTLKEHKLVHNAERTFKCPHCASFYKQRKTL 337
            ...:.:|..|.:.|...|.|.|  ..|.|.|..:|.||.|::.|..:|.|.||.|.:.:.::...
  Fly   242 LTDQCYLSIHLKRHYNQRDFPCPQPECGKRFFSASELKHHQIAHTQQRPFACPLCPARFLRKSNH 306

  Fly   338 ARHILEIHK 346
            .:| |::|:
  Fly   307 KQH-LKVHE 314

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15436NP_608840.1 zf-AD 4..78 CDD:285071 8/32 (25%)
C2H2 Zn finger 128..148 CDD:275368 7/24 (29%)
C2H2 Zn finger 156..176 CDD:275368 6/19 (32%)
COG5048 <180..341 CDD:227381 55/184 (30%)
C2H2 Zn finger 184..204 CDD:275368 7/19 (37%)
zf-H2C2_2 197..219 CDD:290200 12/21 (57%)
C2H2 Zn finger 212..232 CDD:275368 7/19 (37%)
zf-H2C2_2 224..249 CDD:290200 9/30 (30%)
C2H2 Zn finger 240..260 CDD:275368 5/25 (20%)
zf-H2C2_2 252..276 CDD:290200 6/39 (15%)
C2H2 Zn finger 268..288 CDD:275368 4/19 (21%)
C2H2 Zn finger 296..316 CDD:275368 8/21 (38%)
C2H2 Zn finger 324..341 CDD:275368 3/16 (19%)
CG2120NP_572446.2 C2H2 Zn finger 101..121 CDD:275368 6/19 (32%)
zf-H2C2_2 113..138 CDD:290200 10/24 (42%)
C2H2 Zn finger 129..149 CDD:275368 7/19 (37%)
zf-H2C2_2 142..166 CDD:290200 13/23 (57%)
COG5048 151..>264 CDD:227381 29/112 (26%)
C2H2 Zn finger 157..177 CDD:275368 7/19 (37%)
C2H2 Zn finger 185..206 CDD:275368 5/20 (25%)
C2H2 Zn finger 235..255 CDD:275368 4/19 (21%)
C2H2 Zn finger 263..285 CDD:275368 8/21 (38%)
C2H2 Zn finger 293..313 CDD:275368 5/20 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45468928
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

Return to query results.
Submit another query.