DRSC/TRiP Functional Genomics Resources

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Protein Alignment Paris and CG11398

DIOPT Version :10

Sequence 1:NP_608840.1 Gene:Paris / 33657 FlyBaseID:FBgn0031610 Length:346 Species:Drosophila melanogaster
Sequence 2:NP_569896.1 Gene:CG11398 / 31070 FlyBaseID:FBgn0040366 Length:329 Species:Drosophila melanogaster


Alignment Length:242 Identity:58/242 - (23%)
Similarity:95/242 - (39%) Gaps:30/242 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   114 DDDGKSDSKKVAFECRECHKKYQRKGTFLRHMRTHMDGQSFPCPYCKRNFRLRVTLKAHMKTH-- 176
            |::...:::::.||......::|:.|:           .||.|..|...|..|..|.||..||  
  Fly    21 DEELSLNTEELQFEELNERSQHQQGGS-----------PSFVCRRCPALFLTREELAAHRPTHRY 74

  Fly   177 -----NAAKPYECSHCAKTFAQQSTLQSHERTHTGERPFKCSQCSKTFIKSSDLRRHIRT----- 231
                 ..|..:.|..|.:.|.:.:.|..|...|...|.:.|.:|...|::.|:...|::.     
  Fly    75 QGGQQTPASEHACDACGRVFQKHNALVDHMNAHNDVRNYPCPECPARFVQRSNRECHLKNVHRKV 139

  Fly   232 --HGSERPFKCSKCTKTFTRKFHLDNHFRS-HTGERPFKCSHCPKAFAMKQHLKQHSRLHLPDRP 293
              |....|    .|.|.|.::...|.|.:: |..||...|..|...|:...:.::|...|...:.
  Fly   140 YLHSCPEP----GCKKRFQQRRECDQHVKTVHQNERNLVCDTCSARFSHPVNYRKHLASHGSAKS 200

  Fly   294 FRCSHCPKTFRLSSTLKEHKLVHNAERTFKCPHCASFYKQRKTLARH 340
            :.|..|.|.|........|..||:..:.:.|..|.:.|.:|..|.||
  Fly   201 YGCPICGKLFGRPENRDVHLFVHSICKAYICSVCGADYMRRNQLIRH 247

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ParisNP_608840.1 zf-AD 4..78 CDD:462262
C2H2 Zn finger 128..148 CDD:275368 2/19 (11%)
C2H2 Zn finger 156..176 CDD:275368 7/19 (37%)
COG5048 <180..341 CDD:227381 41/169 (24%)
C2H2 Zn finger 184..204 CDD:275368 5/19 (26%)
C2H2 Zn finger 212..232 CDD:275368 5/26 (19%)
C2H2 Zn finger 240..260 CDD:275368 5/20 (25%)
C2H2 Zn finger 268..288 CDD:275368 4/19 (21%)
C2H2 Zn finger 296..316 CDD:275368 5/19 (26%)
C2H2 Zn finger 324..341 CDD:275368 7/17 (41%)
CG11398NP_569896.1 C2H2 Zn finger 52..72 CDD:275368 7/19 (37%)
C2H2 Zn finger 87..107 CDD:275368 5/19 (26%)
C2H2 Zn finger 115..136 CDD:275368 5/20 (25%)
C2H2 Zn finger 144..165 CDD:275368 6/24 (25%)
C2H2 Zn finger 175..195 CDD:275368 4/19 (21%)
C2H2 Zn finger 203..223 CDD:275368 5/19 (26%)
C2H2 Zn finger 231..247 CDD:275368 5/15 (33%)
Blue background indicates that the domain is not in the aligned region.

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