DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG15436 and Zfp119b

DIOPT Version :9

Sequence 1:NP_608840.1 Gene:CG15436 / 33657 FlyBaseID:FBgn0031610 Length:346 Species:Drosophila melanogaster
Sequence 2:XP_011244758.1 Gene:Zfp119b / 240120 MGIID:2385323 Length:570 Species:Mus musculus


Alignment Length:326 Identity:114/326 - (34%)
Similarity:163/326 - (50%) Gaps:27/326 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 RRTRVSIAEMIAQCTGFEVKRGD-LFSEMICPQC----YEDVKSAY---GIRQTCEESHQFYCRV 79
            |||.:.    :..|   |....| |.|...|.|.    ..|.|..|   |...|.....|.|.|:
Mouse   250 RRTHLG----MKSC---EYNHEDKLISHQNCNQVGRTNTRDTKHDYHQWGKAFTYPSYLQIYERI 307

  Fly    80 RDEGIEDALCALLEEEDWEISEDEDARIDSASAADDDGKSDSKKVAFECRECHKKYQRKGTFLRH 144
            .           .||:.:|.|:...| ....|......:..:.:..::|.:|.|.:..|.....|
Mouse   308 H-----------TEEKPYECSQCGRA-FTCHSTLQIHERIHTGEKPYKCNQCGKTFACKRYLQIH 360

  Fly   145 MRTHMDGQSFPCPYCKRNFRLRVTLKAHMKTHNAAKPYECSHCAKTFAQQSTLQSHERTHTGERP 209
            .:.|...:.:.|..|.:.|.....|:.|.:.|...|||:||.|.|.||..|.||.|||.||||:|
Mouse   361 EKIHTGEKPYKCNQCGKAFACNSYLQIHERIHTGEKPYKCSQCGKAFACNSYLQMHERIHTGEKP 425

  Fly   210 FKCSQCSKTFIKSSDLRRHIRTHGSERPFKCSKCTKTFTRKFHLDNHFRSHTGERPFKCSHCPKA 274
            :||:||.|.|..:|:|::|.|||..|:|:||::|.|.||....|..|.|.||||:|:||:.|.||
Mouse   426 YKCNQCGKAFACNSNLQKHERTHTGEKPYKCNQCGKAFTCHSTLQIHERIHTGEKPYKCNQCSKA 490

  Fly   275 FAMKQHLKQHSRLHLPDRPFRCSHCPKTFRLSSTLKEHKLVHNAERTFKCPHCASFYKQRKTLAR 339
            ||.|::|:.|.|:|..::|:.|:.|.|.|..||:|.:|:..|.||:.|:|..|...:....||.:
Mouse   491 FARKRYLQIHERIHTGEKPYECNQCGKAFAYSSSLNKHERTHTAEKPFECNQCGIAFACLSTLQK 555

  Fly   340 H 340
            |
Mouse   556 H 556

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15436NP_608840.1 zf-AD 4..78 CDD:285071 17/62 (27%)
C2H2 Zn finger 128..148 CDD:275368 5/19 (26%)
C2H2 Zn finger 156..176 CDD:275368 5/19 (26%)
COG5048 <180..341 CDD:227381 78/161 (48%)
C2H2 Zn finger 184..204 CDD:275368 12/19 (63%)
zf-H2C2_2 197..219 CDD:290200 15/21 (71%)
C2H2 Zn finger 212..232 CDD:275368 9/19 (47%)
zf-H2C2_2 224..249 CDD:290200 12/24 (50%)
C2H2 Zn finger 240..260 CDD:275368 8/19 (42%)
zf-H2C2_2 252..276 CDD:290200 13/23 (57%)
C2H2 Zn finger 268..288 CDD:275368 10/19 (53%)
C2H2 Zn finger 296..316 CDD:275368 8/19 (42%)
C2H2 Zn finger 324..341 CDD:275368 5/17 (29%)
Zfp119bXP_011244758.1 KRAB 31..71 CDD:366587
C2H2 Zn finger 156..176 CDD:275368
C2H2 Zn finger 184..202 CDD:275368
C2H2 Zn finger 292..308 CDD:275368 5/15 (33%)
C2H2 Zn finger 316..336 CDD:275368 3/20 (15%)
zf-H2C2_2 329..353 CDD:372612 3/23 (13%)
C2H2 Zn finger 344..364 CDD:275368 5/19 (26%)
zf-H2C2_2 356..381 CDD:372612 5/24 (21%)
C2H2 Zn finger 372..392 CDD:275368 5/19 (26%)
COG5048 <396..552 CDD:227381 75/155 (48%)
C2H2 Zn finger 400..420 CDD:275368 12/19 (63%)
C2H2 Zn finger 428..448 CDD:275368 9/19 (47%)
C2H2 Zn finger 456..476 CDD:275368 8/19 (42%)
C2H2 Zn finger 484..504 CDD:275368 10/19 (53%)
C2H2 Zn finger 512..532 CDD:275368 8/19 (42%)
C2H2 Zn finger 540..560 CDD:275368 5/17 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.