DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15436 and ZNF560

DIOPT Version :9

Sequence 1:NP_608840.1 Gene:CG15436 / 33657 FlyBaseID:FBgn0031610 Length:346 Species:Drosophila melanogaster
Sequence 2:NP_689689.2 Gene:ZNF560 / 147741 HGNCID:26484 Length:790 Species:Homo sapiens


Alignment Length:310 Identity:94/310 - (30%)
Similarity:153/310 - (49%) Gaps:29/310 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 CPQCYEDVKSAYGIRQTCEESHQFYCRVRDEGIEDALC--ALLE-------------EEDWEISE 101
            |.:|.:...::.|:.:      ...|..|::..:...|  |.:.             |:.:|..|
Human   406 CKECGKAFGTSAGLIE------HIRCHAREKTFKCDHCGKAFISYPSLFGHLRVHNGEKPYEHKE 464

  Fly   102 DEDARIDSASAADDDGKSDSKKVAFECRECHKKYQRKGTFLRHMRTHMDGQSFPCPYCKRNFRLR 166
            ...| ..::|...:|.:|::.:..|:|.:|.|.:....:...|:|||...:.|.|..|.:.|...
Human   465 YGKA-FGTSSGVIEDRRSNTGQKRFDCDQCGKVFVSFSSLFAHLRTHTGEKPFKCYKCGKPFTSS 528

  Fly   167 VTLKAHMKTHNAAKPYECSHCAKTFAQQSTLQSHERTHTGERPFKCSQCSKTFIKSSDLRRHIRT 231
            ..|:.||:||...:.|:|..|.|.|.:.|.|..|.|||.||:|::|.:|.|.|.:.|.|.:|:|.
Human   529 ACLRIHMRTHTEERLYQCKKCGKAFTKCSYLTKHLRTHAGEKPYECMKCGKAFTERSYLTKHLRR 593

  Fly   232 HGSERPFKCSKCTKTFTRKFHLDNHFRSHTGERPFKCSHCPKAFAMKQHLKQHSRLHLPDRPFRC 296
            |..|:|::|.||.|.||.:..|..|.|.|||::|::...|.|||.:...|..|.|.|...:|::|
Human   594 HSGEKPYECKKCGKAFTERSDLTKHLRRHTGDKPYEYKDCGKAFVVSSSLVDHLRTHTGYKPYKC 658

  Fly   297 SHCPKTFRLSSTLKEHKLVHNAERTFKCPHCAS-------FYKQRKTLAR 339
            :.|.|.:..|..|.:|...|.||:|.:|..|.:       |:.:.|||.:
Human   659 NACEKAYSRSCVLTQHLKTHAAEKTSECNACGNSFRNSMCFHDRLKTLTK 708

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15436NP_608840.1 zf-AD 4..78 CDD:285071 3/25 (12%)
C2H2 Zn finger 128..148 CDD:275368 5/19 (26%)
C2H2 Zn finger 156..176 CDD:275368 6/19 (32%)
COG5048 <180..341 CDD:227381 63/167 (38%)
C2H2 Zn finger 184..204 CDD:275368 8/19 (42%)
zf-H2C2_2 197..219 CDD:290200 11/21 (52%)
C2H2 Zn finger 212..232 CDD:275368 8/19 (42%)
zf-H2C2_2 224..249 CDD:290200 11/24 (46%)
C2H2 Zn finger 240..260 CDD:275368 9/19 (47%)
zf-H2C2_2 252..276 CDD:290200 10/23 (43%)
C2H2 Zn finger 268..288 CDD:275368 7/19 (37%)
C2H2 Zn finger 296..316 CDD:275368 6/19 (32%)
C2H2 Zn finger 324..341 CDD:275368 6/23 (26%)
ZNF560NP_689689.2 KRAB 13..69 CDD:214630
KRAB 13..50 CDD:279668
KRAB 110..161 CDD:214630
KRAB 110..149 CDD:279668
C2H2 Zn finger 294..314 CDD:275368
C2H2 Zn finger 323..342 CDD:275368
COG5048 344..754 CDD:227381 94/310 (30%)
C2H2 Zn finger 350..370 CDD:275368
zf-H2C2_2 362..386 CDD:290200
C2H2 Zn finger 378..398 CDD:275368
C2H2 Zn finger 406..426 CDD:275368 3/25 (12%)
C2H2 Zn finger 434..454 CDD:275368 2/19 (11%)
C2H2 Zn finger 490..510 CDD:275368 5/19 (26%)
zf-H2C2_2 502..527 CDD:290200 8/24 (33%)
C2H2 Zn finger 518..538 CDD:275368 6/19 (32%)
zf-H2C2_2 531..554 CDD:290200 9/22 (41%)
C2H2 Zn finger 546..566 CDD:275368 8/19 (42%)
zf-H2C2_2 558..582 CDD:290200 11/23 (48%)
C2H2 Zn finger 574..594 CDD:275368 8/19 (42%)
zf-H2C2_2 586..610 CDD:290200 10/23 (43%)
zf-C2H2 600..622 CDD:278523 9/21 (43%)
C2H2 Zn finger 602..622 CDD:275368 9/19 (47%)
C2H2 Zn finger 630..650 CDD:275368 7/19 (37%)
C2H2 Zn finger 658..678 CDD:275368 6/19 (32%)
C2H2 Zn finger 714..734 CDD:275368
zf-H2C2_2 726..751 CDD:290200
C2H2 Zn finger 742..762 CDD:275368
zf-H2C2_2 757..779 CDD:290200
C2H2 Zn finger 770..790 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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