DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Paris and LOC1278927

DIOPT Version :10

Sequence 1:NP_608840.1 Gene:Paris / 33657 FlyBaseID:FBgn0031610 Length:346 Species:Drosophila melanogaster
Sequence 2:XP_061512762.1 Gene:LOC1278927 / 1278927 VectorBaseID:AGAMI1_009459 Length:1163 Species:Anopheles gambiae


Alignment Length:243 Identity:94/243 - (38%)
Similarity:133/243 - (54%) Gaps:7/243 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly   109 SASAADDDGK------SDSKKVAFECRECHKKYQRKGTFLRHMRTHMDGQSFPCPYCKRNFRLRV 167
            :.::|..:||      ..:.:..|:|..|.|.:.||.....|:|.|.....:.||||.:.|..:.
Mosquito   123 ATTSAHSNGKLNHIRPGPTGESPFKCSYCAKSFTRKEHLTNHVRQHTGESPYRCPYCGKTFTRKE 187

  Fly   168 TLKAHMKTHNAAKPYECSHCAKTFAQQSTLQSHERTHTGERPFKCSQCSKTFIKSSDLRRHIRTH 232
            .|..|::.|....||:|::|.|.|.::..|.:|.|.||||.||:|:.|.|.|.:...|..|.|.|
Mosquito   188 HLTNHVRLHTGETPYQCTYCGKKFTRKEHLTNHVRLHTGETPFQCTYCEKKFTRKEHLTNHTRLH 252

  Fly   233 GSERPFKCSKCTKTFTRKFHLDNHFRSHTGERPFKCSHCPKAFAMKQHLKQHSRLHLPDRPFRCS 297
            ..|.||:||.|.|.||||.||.||.|.||||.||:||:|.|.|..|:||..|.|||..:.||:||
Mosquito   253 TGETPFQCSYCQKKFTRKEHLTNHVRLHTGETPFQCSYCQKKFTRKEHLTYHVRLHTGETPFQCS 317

  Fly   298 HCPKTFRLSSTLKEHKLVHNAERTFKCPHCASFYKQRKTLARHILEIH 345
            :|.|.|.....|..|..:|..|..::|.:|...:.:::.|..|: .||
Mosquito   318 YCQKKFTRKEHLTNHVRLHTGETPYQCTYCDKKFTRKEHLTNHV-RIH 364

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ParisNP_608840.1 zf-AD 4..78 CDD:462262
C2H2 Zn finger 128..148 CDD:275368 7/19 (37%)
C2H2 Zn finger 156..176 CDD:275368 7/19 (37%)
COG5048 <180..341 CDD:227381 71/160 (44%)
C2H2 Zn finger 184..204 CDD:275368 7/19 (37%)
C2H2 Zn finger 212..232 CDD:275368 7/19 (37%)
C2H2 Zn finger 240..260 CDD:275368 13/19 (68%)
C2H2 Zn finger 268..288 CDD:275368 10/19 (53%)
C2H2 Zn finger 296..316 CDD:275368 7/19 (37%)
C2H2 Zn finger 324..341 CDD:275368 3/16 (19%)
LOC1278927XP_061512762.1 None
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.