DRSC/TRiP Functional Genomics Resources

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Protein Alignment Paris and LOC1277286

DIOPT Version :10

Sequence 1:NP_608840.1 Gene:Paris / 33657 FlyBaseID:FBgn0031610 Length:346 Species:Drosophila melanogaster
Sequence 2:XP_001688958.1 Gene:LOC1277286 / 1277286 VectorBaseID:AGAMI1_008533 Length:251 Species:Anopheles gambiae


Alignment Length:220 Identity:90/220 - (40%)
Similarity:123/220 - (55%) Gaps:5/220 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly   109 SASAADDDG-KSDSKKVAFECRECHKKYQRKGTFLRHMRTHMDGQSFPCPYCKRNFRLRVTLKAH 172
            |..|.:..| |..:....|.|.||:|.:::..|...||:.|...:.:.|..|.:.||...||..|
Mosquito     2 SQQAVESGGMKISNCSKPFACTECNKLFRQLSTLTNHMKIHTGEKPYKCTICMKEFRQTTTLSNH 66

  Fly   173 MKTHNAAKPYECSHCAKTFAQQSTLQSHERTHTGERPFKCSQCSKTFIKSSDLRRHIRTHGSE-- 235
            ||.|...||:.|:.|.|.|.|.|||.:|::.||||:||:||.|.|.|.:||.|..|||.|..:  
Mosquito    67 MKIHTGEKPFNCNFCDKQFRQLSTLSNHKKIHTGEKPFECSVCGKQFRQSSTLNSHIRIHSDDKF 131

  Fly   236 --RPFKCSKCTKTFTRKFHLDNHFRSHTGERPFKCSHCPKAFAMKQHLKQHSRLHLPDRPFRCSH 298
              :|||||.|.|.|.:...|.||.:.||||:|:.|::|.|.|.....|..|.::|..::||.||.
Mosquito   132 CIKPFKCSICPKEFRQTTTLANHIKIHTGEKPYACTYCSKTFRQTGTLSNHLKIHTGEKPFECSV 196

  Fly   299 CPKTFRLSSTLKEHKLVHNAERTFK 323
            |.|.||.||||..|..:|..::..|
Mosquito   197 CGKQFRQSSTLNSHIRIHADDKYCK 221

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ParisNP_608840.1 zf-AD 4..78 CDD:462262
C2H2 Zn finger 128..148 CDD:275368 7/19 (37%)
C2H2 Zn finger 156..176 CDD:275368 9/19 (47%)
COG5048 <180..341 CDD:227381 67/148 (45%)
C2H2 Zn finger 184..204 CDD:275368 9/19 (47%)
C2H2 Zn finger 212..232 CDD:275368 11/19 (58%)
C2H2 Zn finger 240..260 CDD:275368 8/19 (42%)
C2H2 Zn finger 268..288 CDD:275368 6/19 (32%)
C2H2 Zn finger 296..316 CDD:275368 11/19 (58%)
C2H2 Zn finger 324..341 CDD:275368 90/220 (41%)
LOC1277286XP_001688958.1 C2H2 Zn finger 22..42 CDD:275368 7/19 (37%)
COG5048 <46..212 CDD:227381 75/165 (45%)
C2H2 Zn finger 50..70 CDD:275368 9/19 (47%)
zf-H2C2_2 63..87 CDD:463886 11/23 (48%)
C2H2 Zn finger 78..98 CDD:275368 9/19 (47%)
C2H2 Zn finger 106..126 CDD:275368 11/19 (58%)
C2H2 Zn finger 138..158 CDD:275368 8/19 (42%)
C2H2 Zn finger 166..186 CDD:275368 6/19 (32%)
C2H2 Zn finger 194..214 CDD:275368 11/19 (58%)
Blue background indicates that the domain is not in the aligned region.

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