DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15443 and TMCO6

DIOPT Version :10

Sequence 1:NP_608839.1 Gene:CG15443 / 33656 FlyBaseID:FBgn0031609 Length:358 Species:Drosophila melanogaster
Sequence 2:NP_001287909.1 Gene:TMCO6 / 55374 HGNCID:28814 Length:499 Species:Homo sapiens


Alignment Length:357 Identity:85/357 - (23%)
Similarity:134/357 - (37%) Gaps:79/357 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 RNKIRAYAKDHRVECRIKAKDSLR---------------IGLGQVKQEVAALEMGTKDVIGMASR 68
            |.:..|..:..|.|.::.:|..||               :|..:|:|.:...:.||::       
Human    23 RREREAALRKARREQQLVSKRLLRNDAPEEAGEGCVAAILGETEVQQFLRQAQRGTEE------- 80

  Fly    69 IKRRKHATSEDLCRLSLGFLQSNDNINAFAAIPGAIQVLVKELTGPHIQRQTDAVECLCNLSLGE 133
             |.|:.|    |..|..| ||..:....|..:.|:::.||..||......|.:|..||..||..|
Human    81 -KEREGA----LVSLRRG-LQHPETQQTFIRLEGSMRTLVGLLTSNQALLQLEAARCLHELSHSE 139

  Fly   134 AHVSEKIVTLAGSYMVTYLDGKAERLKRSCLWTLANVLGTCDKAGSVLLQMQIVPKLWRLYIEPN 198
            .....:....|.||::|||...:......||:||.|::...:.....||...|||.|......|:
Human   140 QSTVAEACLPATSYLLTYLSSHSSDFIELCLYTLGNLIVESEAVRRQLLPQGIVPALAACIQSPH 204

  Fly   199 GCQEDA---AICLSLVATRCPQHV---SDEDRRYIGQNLPEKLHGQPASEYFMYIVHQLEIVTQE 257
            ....:|   |:...|.|...|:.:   :......:...||:               |.|:::...
Human   205 VAVLEALGYALSQLLQAEEAPEKIIPPASASSSILASTLPQ---------------HMLQMLQPG 254

  Fly   258 HKLDAQQAECLVRFFEATLASPADRLCLIYAV-RVMTNLVALGD---TSLIFALADPQNLVQTLN 318
            .||:...|   |.|          ..||.|.: ..::|.:.:|.   ::|...|.|....||   
Human   255 PKLNPGVA---VEF----------AWCLHYIICSQVSNPLLIGHGALSTLGLLLLDLAGAVQ--- 303

  Fly   319 QLFALRDPDLNLDAMRLLKNCLHLKVADSNLV 350
               ...|..|.|.|..:|: ||      |||:
Human   304 ---KTEDAGLELLACPVLR-CL------SNLL 325

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15443NP_608839.1 armadillo repeat 104..129 CDD:293788 8/24 (33%)
armadillo repeat 137..172 CDD:293788 11/34 (32%)
armadillo repeat 178..209 CDD:293788 9/33 (27%)
TMCO6NP_001287909.1 SRP1 23..>399 CDD:227396 85/357 (24%)
armadillo repeat 104..135 CDD:293788 9/30 (30%)
armadillo repeat 143..178 CDD:293788 11/34 (32%)
armadillo repeat 184..218 CDD:293788 9/33 (27%)

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