Protein Alignment CG15443 and Tmco6

DIOPT Version :10

• Sequence 1: NP_608839.1
• Gene: CG15443 / 33656
• FlyBaseID: FBgn0031609
• Length: 358
• Species: Drosophila melanogaster
• Sequence 2: NP_001099624.1
• Gene: Tmco6 / 291661
• RGDID: 1309263
• Length: 494
• Species: Rattus norvegicus
• Alignment Length: 376
• Identity: 86/376 - (22%)
• Similarity: 133/376 - (35%)
• Gaps: 103/376 - (27%)

  Fly    19 RNKIRAYAKDHRVECRIKAKDSLR---------------IGLGQVKQEVAALEMGTKDVIGMASR 68
            |.:..|..:..|.|.::.:|..||               :|..:|:|.:...:.||.:
  Rat    23 RREREAALRKARREQQLVSKRLLREDAPEETGGQSAAVLLGEAEVQQFLRLAQRGTDE------- 80

  Fly    69 IKRRKHATSEDLCRLSLGFLQSNDNINAFAAIPGAIQVLVKELTGPHIQRQTDAVECLCNLSLGE 133
             |.|:.|    |..|..| ||..|....|..:.|:::.||..||......|.:|..||..||..|
  Rat    81 -KEREKA----LVSLRRG-LQHPDTQQTFIRLEGSMRTLVGLLTSNRALLQLEAARCLHELSHSE 139

  Fly   134 AHVSEKIVTLAGSYMVTYLDGKAERLKRSCLWTLANVLGTCDKAGSVLLQMQIVPKLWRLYIEPN 198
            .....:....|.||::|||.|.:......||:||.|::...:.....||...|||..
  Rat   140 QSAVAEACLPATSYLLTYLSGHSSDFIELCLYTLGNLIVESEAVRKQLLPQGIVPAF-------- 196

  Fly   199 GCQEDAAICLSLVATRCPQHVSDEDRRYIGQNLPEKLHGQPASEYFMYIVHQLEIVTQEHKLDAQ 263
                  |.|:.      ..||:..:.  :|..|.:.|..:.|.|..:..:           ||:.
  Rat   197 ------AACIQ------SPHVAVLEA--LGYALSQLLQAKEAPEKIIPSI-----------LDSS 236

  Fly   264 QAECLVRFFEATLASPADRL----------CLIYAVRVMTNLVAL----GDTSLIFALADPQNLV 314
            ..:.::|     |..|..:|          ||.|.:....|...|    ...:|:..|.|....|
  Rat   237 LPQQMLR-----LMGPGPKLNLGVAMEFAWCLHYIICSQVNNAVLLTHGALPTLVLLLVDLAGAV 296

  Fly   315 QTLNQLFALRDPDLNLD-----AMRLLKNCL----------HLKVADSNLV 350
            |        |..|:.|:     .:|.|.|.|          .:::.|..||
  Rat   297 Q--------RTDDVGLELLACPVVRCLSNLLTEVPAEAMGQQMELRDERLV 339

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG15443	NP_608839.1	armadillo repeat	104..129	CDD:293788	8/24 (33%)
		armadillo repeat	137..172	CDD:293788	12/34 (35%)
		armadillo repeat	178..209	CDD:293788	7/30 (23%)
Tmco6	NP_001099624.1	SRP1	23..>391	CDD:227396	86/376 (23%)
		armadillo repeat	67..93	CDD:293788	9/37 (24%)
		armadillo repeat	104..135	CDD:293788	9/30 (30%)
		armadillo repeat	143..178	CDD:293788	12/34 (35%)
		armadillo repeat	184..218	CDD:293788	11/55 (20%)