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Protein Alignment RpL27A and LOC690246
DIOPT Version :9
Sequence 1: | NP_001188689.2 |
Gene: | RpL27A / 33654 |
FlyBaseID: | FBgn0285948 |
Length: | 149 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_017447742.1 |
Gene: | LOC690246 / 690246 |
RGDID: | 1582864 |
Length: | 130 |
Species: | Rattus norvegicus |
Alignment Length: | 118 |
Identity: | 67/118 - (56%) |
Similarity: | 87/118 - (73%) |
Gaps: | 4/118 - (3%) |
- Green bases have known domain annotations that are detailed below.
Fly 36 AGGM----HHHRINFDKYHPGYFGKVGMRNFHLRRQHKFRPEINLDKLWSLVGAEKFAELEKEKS 96
|.|| ::|||||||||||||||||||::||:|...|.|.:||||||.||..:......|.|:
Rat 13 AVGMLEARNYHRINFDKYHPGYFGKVGMRHYHLKRSQSFCPTVNLDKLWMLVSEQTRVNAVKNKT 77
Fly 97 TKAPVIDLVKFGYYKLLGRGHLPARPVIVKAKYFSKKAEDKIKKAGGVCLLSA 149
..||:.|:|:.||||:|.:|.||.:|||||||:||::||:|:|..||.|:|.|
Rat 78 GAAPITDIVRSGYYKVLRKGKLPKQPVIVKAKFFSRRAEEKMKGVGGACVLVA 130
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
RpL27A | NP_001188689.2 |
PTZ00160 |
7..149 |
CDD:185489 |
66/116 (57%) |
LOC690246 | XP_017447742.1 |
None |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1445443at2759 |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 1.010 |
|
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