DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpL27A and RGD1562402

DIOPT Version :9

Sequence 1:NP_001188689.2 Gene:RpL27A / 33654 FlyBaseID:FBgn0285948 Length:149 Species:Drosophila melanogaster
Sequence 2:XP_038956794.1 Gene:RGD1562402 / 499133 RGDID:1562402 Length:148 Species:Rattus norvegicus


Alignment Length:143 Identity:98/143 - (68%)
Similarity:118/143 - (82%) Gaps:0/143 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 KKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGMHHHRINFDKYHPGYFGKVGMRNFHLRRQHKFR 71
            :|||||||||||.|||||||||||||.|||||||||||||||||||||||||:|::||:|...|.
  Rat     6 RKTRKLRGHVSHSHGRIGKHRKHPGGLGNAGGMHHHRINFDKYHPGYFGKVGIRHYHLKRNQSFC 70

  Fly    72 PEINLDKLWSLVGAEKFAELEKEKSTKAPVIDLVKFGYYKLLGRGHLPARPVIVKAKYFSKKAED 136
            |.:||||||:||..:......|.|:..||:||:|:.||||:||:|.||.:|||||||:||::||:
  Rat    71 PTVNLDKLWTLVSEQTRVNAAKNKNGVAPIIDVVRSGYYKVLGKGKLPKQPVIVKAKFFSRRAEE 135

  Fly   137 KIKKAGGVCLLSA 149
            |||..||.|:|.|
  Rat   136 KIKGVGGACVLVA 148

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL27ANP_001188689.2 PTZ00160 7..149 CDD:185489 97/141 (69%)
RGD1562402XP_038956794.1 PTZ00160 1..148 CDD:185489 97/141 (69%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166340574
Domainoid 1 1.000 179 1.000 Domainoid score I3435
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 227 1.000 Inparanoid score I3392
OMA 1 1.010 - - QHG53607
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001387
OrthoInspector 1 1.000 - - otm46100
orthoMCL 1 0.900 - - OOG6_100748
Panther 1 1.100 - - O PTHR11721
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1116
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1211.900

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