DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gs1l and AT3G48420

DIOPT Version :10

Sequence 1:NP_477228.1 Gene:Gs1l / 33653 FlyBaseID:FBgn0019982 Length:231 Species:Drosophila melanogaster
Sequence 2:NP_566903.1 Gene:AT3G48420 / 824000 AraportID:AT3G48420 Length:319 Species:Arabidopsis thaliana


Alignment Length:246 Identity:62/246 - (25%)
Similarity:96/246 - (39%) Gaps:51/246 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 VFDMDGLLLDTERLYTVATEMILEPYGKTYPFEIKEQVMG------LQTEPL----ARFMVEHYE 67
            :||.||:|:|||:          :.:..::....||:.:.      |..|.|    .:..:..|.
plant    80 LFDCDGVLVDTEK----------DGHRISFNDTFKERDLNVTWDVDLYGELLKIGGGKERMTAYF 134

  Fly    68 LPMSWEEYARQQRA------------NTEILM-----RNAQLMPGAERLLRHLHANKVPFCLATS 115
            ..:.|.|.|.:..|            .||:.|     :...|.||..:|:.....|.|...:.::
plant   135 NKVGWPEKAPKDEAERKEFIAGLHKQKTELFMVLIEKKLLPLRPGVAKLVDQALTNGVKVAVCST 199

  Fly   116 SGADMVE-----LKTAQHRELFSLFNHKVCGSSDKEVVNGKPAPDIFLVAAGRFGVPPKPSDCLV 175
            |....|.     |...:..|...:|...|       |...||.|.|:.:||...||  .||.|:|
plant   200 SNEKAVSAIVSCLLGPERAEKIKIFAGDV-------VPKKKPDPAIYNLAAETLGV--DPSKCVV 255

  Fly   176 FEDSPNGVTAANSAGMQVVMVPDPRLSQEKTSHATQVLASLADFKPEQFGL 226
            .|||..|:.||.:|||..::......:.|...:|..|...:.|...|:|.|
plant   256 VEDSAIGLAAAKAAGMTCIVTKSGYTADEDFENADAVFDCIGDPPEERFDL 306

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gs1lNP_477228.1 HAD_AtGPP-like 9..198 CDD:319831 55/216 (25%)
AT3G48420NP_566903.1 PLN02779 37..317 CDD:215416 62/246 (25%)

Return to query results.
Submit another query.