DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gs1l and Pudp

DIOPT Version :9

Sequence 1:NP_477228.1 Gene:Gs1l / 33653 FlyBaseID:FBgn0019982 Length:231 Species:Drosophila melanogaster
Sequence 2:NP_080384.2 Gene:Pudp / 67365 MGIID:1914615 Length:234 Species:Mus musculus


Alignment Length:225 Identity:118/225 - (52%)
Similarity:147/225 - (65%) Gaps:1/225 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 RKVTHCVFDMDGLLLDTERLYTVATEMILEPYGKTYPFEIKEQVMGLQTEPLARFMVEHYELPMS 71
            |.|||.:||:|||:|:||.|||...|.|...|||.|.:::|..|||.:....|:.:||...||:|
Mouse    11 RPVTHLIFDLDGLILNTEDLYTDVFEEICNRYGKKYNWDVKSLVMGKKALETAQTIVEFLNLPIS 75

  Fly    72 WEEYARQQRANTEILMRNAQLMPGAERLLRHLHANKVPFCLATSSGADMVELKTAQHRELFSLFN 136
            .||..::.:...::::..|..|||||.|:.||..:::||.|||||.....:.||::|...|.||:
Mouse    76 KEELLKESQEKLQMVLHTAGFMPGAEELIHHLKKHRLPFALATSSETVTFQTKTSRHTGFFGLFH 140

  Fly   137 HKVCGSSDKEVVNGKPAPDIFLVAAGRFGVPPKPSDCLVFEDSPNGVTAANSAGMQVVMVPDPRL 201
            |.|.| .|.||.||||..||||..|.||..||.|.||||||||||||.||...||||||||...|
Mouse   141 HIVLG-DDPEVKNGKPGMDIFLTCAKRFSPPPDPKDCLVFEDSPNGVEAAIHCGMQVVMVPHENL 204

  Fly   202 SQEKTSHATQVLASLADFKPEQFGLPAFTD 231
            |.:.|..||.||:||.|||||.|||||||:
Mouse   205 SADLTRKATLVLSSLHDFKPELFGLPAFTE 234

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gs1lNP_477228.1 YcjU 12..220 CDD:223710 103/207 (50%)
HAD_like 16..231 CDD:304363 111/214 (52%)
PudpNP_080384.2 PGMB-YQAB-SF 16..199 CDD:213673 90/183 (49%)
HAD_like 20..233 CDD:304363 110/213 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167849773
Domainoid 1 1.000 176 1.000 Domainoid score I3624
eggNOG 1 0.900 - - E1_COG0637
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H8093
Inparanoid 1 1.050 219 1.000 Inparanoid score I3558
Isobase 1 0.950 - 0 Normalized mean entropy S1244
OMA 1 1.010 - - QHG57193
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001355
OrthoInspector 1 1.000 - - oto93171
orthoMCL 1 0.900 - - OOG6_100310
Panther 1 1.100 - - LDO PTHR18901
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1909
SonicParanoid 1 1.000 - - X845
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1716.740

Return to query results.
Submit another query.