DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gs1l and Pudp

DIOPT Version :9

Sequence 1:NP_477228.1 Gene:Gs1l / 33653 FlyBaseID:FBgn0019982 Length:231 Species:Drosophila melanogaster
Sequence 2:NP_001099616.1 Gene:Pudp / 291585 RGDID:1305101 Length:234 Species:Rattus norvegicus


Alignment Length:235 Identity:120/235 - (51%)
Similarity:155/235 - (65%) Gaps:5/235 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MANKV----LRKVTHCVFDMDGLLLDTERLYTVATEMILEPYGKTYPFEIKEQVMGLQTEPLARF 61
            ||..|    ||.|||.:||:|||||:||.|||...:.|...|||.|.:::|..|||.:.....:.
  Rat     1 MAEAVPVPQLRPVTHLIFDLDGLLLNTEDLYTDVFQAICSRYGKKYNWDVKSLVMGKKAPETTQI 65

  Fly    62 MVEHYELPMSWEEYARQQRANTEILMRNAQLMPGAERLLRHLHANKVPFCLATSSGADMVELKTA 126
            :|:..:||:|.|:...:.:...:.::..|.||||||.|:.||..|::||.|||||.....:.||:
  Rat    66 IVDFLKLPISKEQLLEESQERLQKVLHTAALMPGAEELIHHLRKNRLPFALATSSATLSFQTKTS 130

  Fly   127 QHRELFSLFNHKVCGSSDKEVVNGKPAPDIFLVAAGRFGVPPKPSDCLVFEDSPNGVTAANSAGM 191
            :::..||||:|.|.| .|.||:|.||||||||..|.||..||.|.||||||||||||.||.:.||
  Rat   131 RYKGFFSLFHHIVLG-DDPEVINSKPAPDIFLTCAKRFSPPPNPEDCLVFEDSPNGVEAAVACGM 194

  Fly   192 QVVMVPDPRLSQEKTSHATQVLASLADFKPEQFGLPAFTD 231
            ||||||...||.:.|:.||.||:||.:||||.||||||.:
  Rat   195 QVVMVPHENLSSDLTTKATLVLSSLHEFKPELFGLPAFDE 234

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gs1lNP_477228.1 YcjU 12..220 CDD:223710 102/207 (49%)
HAD_like 16..231 CDD:304363 110/214 (51%)
PudpNP_001099616.1 HAD_AtGPP-like 13..201 CDD:319831 95/188 (51%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166353435
Domainoid 1 1.000 183 1.000 Domainoid score I3356
eggNOG 1 0.900 - - E1_COG0637
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H8093
Inparanoid 1 1.050 229 1.000 Inparanoid score I3380
OMA 1 1.010 - - QHG57193
OrthoDB 1 1.010 - - D1510544at2759
OrthoFinder 1 1.000 - - FOG0001355
OrthoInspector 1 1.000 - - oto96720
orthoMCL 1 0.900 - - OOG6_100310
Panther 1 1.100 - - LDO PTHR18901
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X845
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1514.770

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