Protein Alignment Secp43 and RBP47C'

DIOPT Version :10

• Sequence 1: NP_608837.2
• Gene: Secp43 / 33652
• FlyBaseID: FBgn0031607
• Length: 336
• Species: Drosophila melanogaster
• Sequence 2: NP_175181.1
• Gene: RBP47C' / 841159
• AraportID: AT1G47500
• Length: 434
• Species: Arabidopsis thaliana
• Alignment Length: 215
• Identity: 81/215 - (37%)
• Similarity: 125/215 - (58%)
• Gaps: 14/215 - (6%)

  Fly     8 LWMGSLESYMTENFIIAAFRKMGE-DPTTVRLMRNKYTGEPAGYCFVNFISDDHALDAMHKLNGK 71
            :|:|.|:::|.|.::.:||....| :..:::::|||:.|...||.||.|.|.|.|...:.:.||.
plant   105 IWVGDLQNWMDEAYLNSAFTSAEEREIVSLKVIRNKHNGSSEGYGFVEFESHDVADKVLQEFNGA 169

  Fly    72 PIPGTNPIVRFRLNSASNS---YKLPGNEREFSVWVGDLSSDVDDYQLYKVFSSKFTSIKTAKVI 133
            |:|.|:.  .||||.||.|   .:|..|..:.|::||||:.||.|..|::.||.|:.|:|.|||:
plant   170 PMPNTDQ--PFRLNWASFSTGEKRLENNGPDLSIFVGDLAPDVSDALLHETFSEKYPSVKAAKVV 232

  Fly   134 LD-SLGFSKGYGFVRFGIEDEQKSALYDMNGYIGLGTKPIKICNAVPKPKS---ELGGAVGEGNT 194
            || :.|.||||||||||.|:|:..|:.:||| :...::.::|..|.|:..:   :.||.:..|..
plant   233 LDANTGRSKGYGFVRFGDENERTKAMTEMNG-VKCSSRAMRIGPATPRKTNGYQQQGGYMPSGAF 296

  Fly   195 NYGYGSGMTA---AGGTDYS 211
            ....|..:..   .||.|.|
plant   297 TRSEGDTINTTIFVGGLDSS 316

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Secp43	NP_608837.2	RRM1_SECp43	7..90	CDD:410022	31/82 (38%)
		RRM2_SECp43_like	99..178	CDD:409781	37/79 (47%)
		Trnau1ap	210..330	CDD:465438	1/2 (50%)
RBP47C'	NP_175181.1	RRM1_SECp43_like	104..186	CDD:409780	31/82 (38%)
		RRM2_SECp43_like	198..277	CDD:409781	37/79 (47%)
		RRM3_NGR1_NAM8_like	305..376	CDD:409782	4/12 (33%)