Protein Alignment Secp43 and RBP47C

DIOPT Version :9

• Sequence 1: NP_608837.2
• Gene: Secp43 / 33652
• FlyBaseID: FBgn0031607
• Length: 336
• Species: Drosophila melanogaster
• Sequence 2: NP_175180.1
• Gene: RBP47C / 841157
• AraportID: AT1G47490
• Length: 432
• Species: Arabidopsis thaliana
• Alignment Length: 215
• Identity: 82/215 - (38%)
• Similarity: 121/215 - (56%)
• Gaps: 14/215 - (6%)

  Fly     8 LWMGSLESYMTENFIIAAFRKMGE-DPTTVRLMRNKYTGEPAGYCFVNFISDDHALDAMHKLNGK 71
            :|:|.|..:|.|.::.::|....| :..:|:::|||..|...||.||.|.|.|.|...:.:.||.
plant   103 IWVGDLHHWMDEAYLNSSFASGDEREIVSVKVIRNKNNGLSEGYGFVEFESHDVADKVLREFNGT 167

  Fly    72 PIPGTNPIVRFRLNSASNS---YKLPGNEREFSVWVGDLSSDVDDYQLYKVFSSKFTSIKTAKVI 133
            .:|.|:.  .||||.||.|   .:|..|..:.|::|||||.||.|..|::.||.|:.|:|.|||:
plant   168 TMPNTDQ--PFRLNWASFSTGEKRLENNGPDLSIFVGDLSPDVSDNLLHETFSEKYPSVKAAKVV 230

  Fly   134 LD-SLGFSKGYGFVRFGIEDEQKSALYDMNGYIGLGTKPIKICNAVPKPKS---ELGGAVGEGNT 194
            || :.|.||||||||||.|:|:..|:.:||| :...::.::|..|.|:..:   :.||.:..|..
plant   231 LDANTGRSKGYGFVRFGDENERTKAMTEMNG-VKCSSRAMRIGPATPRKTNGYQQQGGYMPNGTL 294

  Fly   195 NYGYGSGMTA---AGGTDYS 211
            ....|..|..   .||.|.|
plant   295 TRPEGDIMNTTIFVGGLDSS 314

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Secp43	NP_608837.2	RRM1_SECp43	7..90	CDD:241054	30/82 (37%)
		RRM2_SECp43	99..180	CDD:241056	39/81 (48%)
RBP47C	NP_175180.1	PABP-1234	102..>385	CDD:130689	82/215 (38%)
		RRM2_SECp43_like	196..275	CDD:240791	38/79 (48%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	1	1.000	74	1.000	Domainoid score	I3224
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D775799at2759
OrthoFinder	1	1.000	-	-		FOG0001306
OrthoInspector	1	1.000	-	-		otm2563
orthoMCL	1	0.900	-	-		OOG6_102296
Panther	1	1.100	-	-	O	PTHR47640
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X1010
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	1	0.960	-	-
	9	8.880