Protein Alignment Secp43 and RBP45B

DIOPT Version :10

• Sequence 1: NP_608837.2
• Gene: Secp43 / 33652
• FlyBaseID: FBgn0031607
• Length: 336
• Species: Drosophila melanogaster
• Sequence 2: NP_172630.1
• Gene: RBP45B / 837708
• AraportID: AT1G11650
• Length: 405
• Species: Arabidopsis thaliana
• Alignment Length: 360
• Identity: 105/360 - (29%)
• Similarity: 153/360 - (42%)
• Gaps: 110/360 - (30%)

  Fly     8 LWMGSLESYMTENFIIAAFRKMGEDPTTVRLMRNKYTGEPAGYCFVNFISDDHALDAMHKLNGKP 72
            ||:|.|:.:|.|||:...|...|| ..:.:::|||.||:..||.|:.|.|...|...:...|..|
plant    64 LWIGDLQYWMDENFLYGCFAHTGE-MVSAKVIRNKQTGQVEGYGFIEFASHAAAERVLQTFNNAP 127

  Fly    73 IPGTNPIVRFRLNSASNSYKLPGNER----EFSVWVGDLSSDVDDYQLYKVFSSKFTSIKTAKVI 133
            || :.|...||||.||.|   .|::|    :::::||||::||.||.|.:.|.:.:.|:|.|||:
plant   128 IP-SFPDQLFRLNWASLS---SGDKRDDSPDYTIFVGDLAADVTDYILLETFRASYPSVKGAKVV 188

  Fly   134 LDSL-GFSKGYGFVRFGIEDEQKSALYDMNGYIGLGTKPIKICNAVPKPKSELGGAVGEGNTNYG 197
            :|.: |.:||||||||..|.||..|:.:||| :...|:|::|..|..|.     |..|:.::...
plant   189 IDRVTGRTKGYGFVRFSDESEQIRAMTEMNG-VPCSTRPMRIGPAASKK-----GVTGQRDSYQS 247

  Fly   198 YGSGMTA----------AGGTD-----------YSQY---------------------------- 213
            ..:|:|.          .||.|           :|||
plant   248 SAAGVTTDNDPNNTTVFVGGLDASVTDDHLKNVFSQYGEIVHVKIPAGKRCGFVQFSEKSCAEEA 312

  Fly   214 ---------------------------YDPTSTYWQGYQAWQGYYEQAGASI-TDAAAYYQQAMS 250
                                       .||:..|:.||...|   ||.|.:: .|..|||.....
plant   313 LRMLNGVQLGGTTVRLSWGRSPSNKQSGDPSQFYYGGYGQGQ---EQYGYTMPQDPNAYYGGYSG 374

  Fly   251 QSHS-----NPQTLAQHAEAWSAQRSAQYEQQQQQ 280
            ..:|     .||         :.|:..|...||||
plant   375 GGYSGGYQQTPQ---------AGQQPPQQPPQQQQ 400

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Secp43	NP_608837.2	RRM1_SECp43	7..90	CDD:410022	33/81 (41%)
		RRM2_SECp43_like	99..178	CDD:409781	35/79 (44%)
		Trnau1ap	210..330	CDD:465438	25/132 (19%)
RBP45B	NP_172630.1	RRM1_SECp43_like	63..142	CDD:409780	31/79 (39%)
		RRM2_SECp43_like	154..233	CDD:409781	35/79 (44%)
		RRM_SF	260..331	CDD:473069	6/70 (9%)