Protein Alignment Secp43 and AT5G40490

DIOPT Version :10

• Sequence 1: NP_608837.2
• Gene: Secp43 / 33652
• FlyBaseID: FBgn0031607
• Length: 336
• Species: Drosophila melanogaster
• Sequence 2: NP_198865.1
• Gene: AT5G40490 / 834047
• AraportID: AT5G40490
• Length: 423
• Species: Arabidopsis thaliana
• Alignment Length: 289
• Identity: 74/289 - (25%)
• Similarity: 117/289 - (40%)
• Gaps: 63/289 - (21%)

  Fly     7 QLWMGSLESYMTENFIIAAFRKMGEDPTTVRLMRNKYTGEPAGYCFVNFISDDHALDAM----HK 67
            ::::|.|....|....:..|.|.||...:| :|:::.||:|.|:.||.: :|...:|.:    |.
plant    43 KIFVGGLARETTSAEFLKHFGKYGEITDSV-IMKDRKTGQPRGFGFVTY-ADSSVVDKVIQDNHI 105

  Fly    68 LNGKPIPGTNPIVRFRLNSASNSYKLPGNEREFSVWVGDLSSDVDDYQLYKVFSSKFTSIKTAKV 132
            :.||.:.....|.|..:  :||.:|..      .::||.:.|.|||.: :|.|..:|..:|..::
plant   106 IIGKQVEIKRTIPRGSM--SSNDFKTK------KIFVGGIPSSVDDDE-FKEFFMQFGELKEHQI 161

  Fly   133 ILD-SLGFSKGYGFVRFGIEDEQKSALYDMNGYIGLGTKPIKICNAVPK--------------PK 182
            :.| |.|.|:|:|||.:..||.....|...| .|.|....::|..|.||              .:
plant   162 MRDHSTGRSRGFGFVTYESEDMVDHLLAKGN-RIELSGTQVEIKKAEPKKPNSVTTPSKRFGDSR 225

  Fly   183 SELGGAVGEG----------------NTNYGYGSGMTAA-----------GGTDY----SQYY-D 215
            |..||..|:|                .:..|||.|.:..           ||..|    ..|. :
plant   226 SNFGGGYGDGYGGGHGGGYGGPGGPYKSGGGYGGGRSGGYGGYGGEFGGYGGGGYGGGVGPYRGE 290

  Fly   216 PTSTYWQGYQAWQGYYEQAGASITDAAAY 244
            |...|...|....|.|.:.|.|:.....|
plant   291 PALGYSGRYGGGGGGYNRGGYSMGGGGGY 319

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Secp43	NP_608837.2	RRM1_SECp43	7..90	CDD:410022	23/86 (27%)
		RRM2_SECp43_like	99..178	CDD:409781	25/79 (32%)
		Trnau1ap	210..330	CDD:465438	10/40 (25%)
AT5G40490	NP_198865.1	RRM_SF	44..114	CDD:473069	20/71 (28%)
		RRM_SF	131..209	CDD:473069	26/79 (33%)