Protein Alignment Secp43 and AT2G37220

DIOPT Version :10

• Sequence 1: NP_608837.2
• Gene: Secp43 / 33652
• FlyBaseID: FBgn0031607
• Length: 336
• Species: Drosophila melanogaster
• Sequence 2: NP_181259.1
• Gene: AT2G37220 / 818299
• AraportID: AT2G37220
• Length: 289
• Species: Arabidopsis thaliana
• Alignment Length: 281
• Identity: 65/281 - (23%)
• Similarity: 110/281 - (39%)
• Gaps: 74/281 - (26%)

  Fly    64 AMHKLNGKPIP-GT---------NPIVRFRLNSASNSYKL------------------------- 93
            |:...|.|.:| |.         :|.:.|:|||.|.|:.:
plant     9 ALSSFNPKSLPFGVSRPASVSLLSPSLSFKLNSDSVSFSIAAKWNSPASRFARNVAITSEFEVEE 73

  Fly    94 -------PGNEREFS----VWVGDLSSDVDDYQLYKVFSSKFTSIKTAKVILDSL-GFSKGYGFV 146
                   |..|:.||    ::||:|..:||..||.::|.|. .:::..:||.|.: |.|:|:|||
plant    74 DGFADVAPPKEQSFSADLKLFVGNLPFNVDSAQLAQLFESA-GNVEMVEVIYDKITGRSRGFGFV 137

  Fly   147 RFGIEDEQKSALYDMNGYIGLGTKPIKICNAVPKPKSELG------GAVGEGNTNYGYGSGMTAA 205
            ......|.::|....||| .|..:|:::....|.||.|.|      .:.|...:.||.|.|..|.
plant   138 TMSSVSEVEAAAQQFNGY-ELDGRPLRVNAGPPPPKREDGFSRGPRSSFGSSGSGYGGGGGSGAG 201

  Fly   206 GGTDYSQYYDPTSTYWQGYQAWQGYYEQAGASITDAAAYYQQAMSQSHSNPQTLAQHAEAWSAQR 270
            .|   ::.|....::.....|.:..:.:.| .:.:|...|.:...:|              ....
plant   202 SG---NRVYVGNLSWGVDDMALESLFSEQG-KVVEARVIYDRDSGRS--------------KGFG 248

  Fly   271 SAQYEQQQQQQTA-SAANGAE 290
            ...|:..|:.|.| .:.:||:
plant   249 FVTYDSSQEVQNAIKSLDGAD 269

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Secp43	NP_608837.2	RRM1_SECp43	7..90	CDD:410022	11/35 (31%)
		RRM2_SECp43_like	99..178	CDD:409781	27/83 (33%)
		Trnau1ap	210..330	CDD:465438	12/82 (15%)
AT2G37220	NP_181259.1	RRM_SF	92..170	CDD:473069	25/79 (32%)
		RRM	204..287	CDD:440488	12/81 (15%)