Protein Alignment Secp43 and Hnrnpa0

DIOPT Version :10

• Sequence 1: NP_608837.2
• Gene: Secp43 / 33652
• FlyBaseID: FBgn0031607
• Length: 336
• Species: Drosophila melanogaster
• Sequence 2: NP_084148.1
• Gene: Hnrnpa0 / 77134
• MGIID: 1924384
• Length: 305
• Species: Mus musculus
• Alignment Length: 278
• Identity: 66/278 - (23%)
• Similarity: 112/278 - (40%)
• Gaps: 23/278 - (8%)

  Fly     6 CQLWMGSLESYMTENFIIAAFRKMGEDPTTVRLMRNKYTGEPAGYCFVNFISDDHALDAM----H 66
            |:|::|.|....:|:.:...|...| ..|...::.|..|.....:.||.:.:.:.|..||    |
Mouse     7 CKLFIGGLNVQTSESGLRGHFEAFG-TLTDCVVVVNPQTKRSRCFGFVTYSNVEEADAAMAASPH 70

  Fly    67 KLNGKPIPGTNPIVRFRLNSASNSYKLPGNEREFSVWVGDLSSDVDDYQLYKVFSSKFTSIKTAK 131
            .::|      |.:...|..|..:|.:...:.:...::||.|..||.:..|.:.| |:|.:::.|:
Mouse    71 AVDG------NTVELKRAVSREDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHF-SQFGAVEKAE 128

  Fly   132 VILD-SLGFSKGYGFVRFGIED-EQKSALYDMNGYIGLGTKPIKICNAVPKPKSELGGA---VGE 191
            :|.| ..|..:|:|||.|...| ..|:|:...:...|   ..:::..||||.....||.   ...
Mouse   129 IIADKQSGKKRGFGFVYFQSHDAADKAAVVKFHPIQG---HRVEVKKAVPKEDIHAGGGGARAAR 190

  Fly   192 GNTNYGYG-SGMTAAGGTDYSQYYDPTSTYWQGYQAWQGY--YEQAGASITDAAAYYQQAMSQSH 253
            |....|.| .|....||.|.:...........||.::.||  |...|.......:|.........
Mouse   191 GGRGGGRGRGGGGGGGGRDQNGLAKGGGGGGGGYNSYGGYGGYGAYGGGGGGGGSYGGSDYGNGF 255

  Fly   254 SNPQTLAQHAEAWSAQRS 271
            ....:.:||..::...:|
Mouse   256 GGFGSYSQHQSSYGPMKS 273

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Secp43	NP_608837.2	RRM1_SECp43	7..90	CDD:410022	19/86 (22%)
		RRM2_SECp43_like	99..178	CDD:409781	22/80 (28%)
		Trnau1ap	210..330	CDD:465438	10/64 (16%)
Hnrnpa0	NP_084148.1	RRM1_hnRNPA0	5..83	CDD:409764	19/82 (23%)
		RRM_SF	99..178	CDD:473069	26/82 (32%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	178..211		9/32 (28%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	265..305		1/9 (11%)