Protein Alignment Secp43 and CG34354

DIOPT Version :9

• Sequence 1: NP_608837.2
• Gene: Secp43 / 33652
• FlyBaseID: FBgn0031607
• Length: 336
• Species: Drosophila melanogaster
• Sequence 2: NP_001097953.2
• Gene: CG34354 / 5740528
• FlyBaseID: FBgn0085383
• Length: 550
• Species: Drosophila melanogaster
• Alignment Length: 378
• Identity: 89/378 - (23%)
• Similarity: 143/378 - (37%)
• Gaps: 124/378 - (32%)

  Fly     8 LWMGSLESYMTENFIIAAFRKMGEDPTTVRLMRNKYTGEPAGYCFVNFISDDHALDAMHKLNGKP 72
            :::|.|.:.:....:..||...|| .:..|::|:..|.:..||.||:|:....|..|:..:||:.
  Fly    98 IFVGDLSAEIETQQLKDAFTPFGE-ISDCRVVRDPQTLKSKGYGFVSFVKKSEAETAITAMNGQW 161

  Fly    73 IPGTNPIVRFRLNSASNSYKLPGNEREF-------------------SVWVGD----LSSDVDDY 114
            : |:..|   |.|.|:.  |.|..:.:.                   :|:.|.    ||..:::.
  Fly   162 L-GSRSI---RTNWATR--KPPATKADMNAKPLTFDEVYNQSSPTNCTVYCGGINGALSGFLNEE 220

  Fly   115 QLYKVFSSKFTSIKTAKVILDSLGFSKGYGFVRFGIEDEQKSALYDMNGYIGLGTKPIKIC---- 175
            .|.|.| |.:.:|:..:|..|     |||.||||..::....|:..:|. ..:..:|:|..
  Fly   221 ILQKTF-SPYGTIQEIRVFKD-----KGYAFVRFSTKEAATHAIVAVNN-TEINQQPVKCAWGKE 278

  Fly   176 NAVPKPKSEL-GGAVGEGNTNYGYGSGMTAAGGTDYSQ-----YYDPTSTY-----------WQG 223
            :..|...|.: |||:.:|   :.:||...||....|.|     :|.|..||           .|.
  Fly   279 SGDPNHMSAIAGGALAQG---FPFGSAAAAAAAAAYGQQVAGYWYPPAPTYPAAAPASALQPGQF 340

  Fly   224 YQAWQGY-------YEQA-------------------------------------GASITDAAAY 244
            .|..||:       |:||                                     |:::..||..
  Fly   341 LQGMQGFTYGQFAGYQQAGYMGMGVQLPGTWQSVPPQPQLASAAAATAPQITQSVGSALPQAAGV 405

  Fly   245 YQQAMSQSHSNPQTLAQHAEAWSA----------------QRSAQYEQQQQQQ 281
            ....|.|...:|| ||:  :.|.|                |:..|.:||||||
  Fly   406 VAYPMQQFQVSPQ-LAE--DEWLAPSLLVXLPXGMAMYPTQQHQQQQQQQQQQ 455

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Secp43	NP_608837.2	RRM1_SECp43	7..90	CDD:241054	23/81 (28%)
		RRM2_SECp43	99..180	CDD:241056	22/107 (21%)
CG34354	NP_001097953.2	RRM2_TIA1_like	97..171	CDD:240799	21/77 (27%)
		RRM3_TIA1_like	202..278	CDD:240800	22/82 (27%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45463930
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	2	1.840