Protein Alignment Secp43 and Tra2a

DIOPT Version :10

• Sequence 1: NP_608837.2
• Gene: Secp43 / 33652
• FlyBaseID: FBgn0031607
• Length: 336
• Species: Drosophila melanogaster
• Sequence 2: NP_001119768.2
• Gene: Tra2a / 500116
• RGDID: 1562563
• Length: 282
• Species: Rattus norvegicus
• Alignment Length: 190
• Identity: 50/190 - (26%)
• Similarity: 79/190 - (41%)
• Gaps: 25/190 - (13%)

  Fly    77 NPIVRFRLNSASNSYKLPGNEREFSVWVGDLSSDVDDYQLYKVFSSKFTSIKTAKVILDS-LGFS 140
            :|:...|.::.|.:...|..    .:.|..||....:..|.:|| |::..:....|:.|. .|.|
  Rat    98 SPMSNRRRHTGSRANPDPNT----CLGVFGLSLYTTERDLREVF-SRYGPLSGVNVVYDQRTGRS 157

  Fly   141 KGYGFVRFGIEDEQKSALYDMNGYIGLGTKPIKICNAV------PKPKSELGGAV--GEGNTNYG 197
            :|:.||.|...|:.|.|:...|| :.|..:.|::..::      |.|...:|...  |.|....|
  Rat   158 RGFAFVYFERIDDSKEAMERANG-MELDGRRIRVDYSITKRAHTPTPGIYMGRPTHSGGGGGGGG 221

  Fly   198 YGSGMTAAGGTDYSQYYDPTSTYWQGYQAWQGY---YEQAGASITDAAAYYQQAMSQSHS 254
            .|.|....||.....|||  ..|.:||..::.|   |.:...|     .||.:..|:|.|
  Rat   222 GGGGGGGGGGRRRDSYYD--RGYDRGYDRYEDYDYRYRRRSPS-----PYYSRYRSRSRS 274

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Secp43	NP_608837.2	RRM1_SECp43	7..90	CDD:410022	3/12 (25%)
		RRM2_SECp43_like	99..178	CDD:409781	22/79 (28%)
		Trnau1ap	210..330	CDD:465438	14/48 (29%)
Tra2a	NP_001119768.2	RRM_TRA2	116..195	CDD:409798	22/84 (26%)